RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM1YDR120C SIM1P40472 476 aa3.73□□□□□ -1.81
TRM1YDR120C PAC11P40960 533 aa3.73□□□□□ -1.81
TRM1YDR120C EPL1P43572 832 aa3.73□□□□□ -1.81
TRM1YDR120C YGR016WP53209 190 aa3.73□□□□□ -1.81
TRM1YDR120C BOR1P53838 576 aa3.73□□□□□ -1.81
TRM1YDR120C SMF3Q12078 473 aaPredicted RBP3.73□□□□□ -1.81
TRM1YDR120C NFI1Q12216 726 aa3.73□□□□□ -1.81
TRM1YDR120C DAP2P18962 818 aa3.73□□□□□ -1.81
TRM1YDR120C SKN1P33336 771 aa3.73□□□□□ -1.81
TRM1YDR120C NCA3P46955 337 aa3.73□□□□□ -1.81
TRM1YDR120C ASN2P49090 572 aaKnown RBP3.73□□□□□ -1.81
TRM1YDR120C YIP5P53108 310 aa3.73□□□□□ -1.81
TRM1YDR120C IMP4P53941 290 aaKnown RBP3.73□□□□□ -1.81
TRM1YDR120C YDR061WQ12298 539 aa3.73□□□□□ -1.81
TRM1YDR120C CPR3P25719 182 aa3.72□□□□□ -1.81
TRM1YDR120C MUD1P32605 298 aaKnown RBP3.72□□□□□ -1.81
TRM1YDR120C LAS1P36146 502 aaPredicted RBP3.72□□□□□ -1.81
TRM1YDR120C ATP3P38077 311 aaKnown RBP3.72□□□□□ -1.81
TRM1YDR120C ADH5P38113 351 aaKnown RBP3.72□□□□□ -1.81
TRM1YDR120C GDT1P38301 280 aaPredicted RBP3.72□□□□□ -1.81
TRM1YDR120C MNL1P38888 796 aa3.72□□□□□ -1.81
TRM1YDR120C CAJ1P39101 391 aa3.72□□□□□ -1.81
TRM1YDR120C MMF1P40185 145 aaKnown RBP3.72□□□□□ -1.81
TRM1YDR120C JLP2P40206 208 aa3.72□□□□□ -1.81
TRM1YDR120C PRM5P40476 318 aa3.72□□□□□ -1.81
TRM1YDR120C WWM1P43582 211 aaKnown RBP3.72□□□□□ -1.81
TRM1YDR120C TOF1P53840 1238 aa3.72□□□□□ -1.81
TRM1YDR120C RRN11Q04712 507 aa3.72□□□□□ -1.81
TRM1YDR120C IPK1Q06667 281 aa3.72□□□□□ -1.81
TRM1YDR120C YFH1Q07540 174 aa3.72□□□□□ -1.81
TRM1YDR120C CUE5Q08412 411 aaKnown RBP3.72□□□□□ -1.81
TRM1YDR120C RAX1Q08760 435 aa3.72□□□□□ -1.81
TRM1YDR120C RPL12AP0CX53 165 aaKnown RBP3.71□□□□□ -1.82
TRM1YDR120C RPL12BP0CX54 165 aa3.71□□□□□ -1.82
TRM1YDR120C POT1P27796 417 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
TRM1YDR120C YBR139WP38109 508 aa3.71□□□□□ -1.82
TRM1YDR120C TOS3P43637 560 aa3.71□□□□□ -1.82
TRM1YDR120C YGL242CP53066 181 aa3.71□□□□□ -1.82
TRM1YDR120C PRP3Q03338 469 aaPredicted RBP3.71□□□□□ -1.82
TRM1YDR120C URC2Q04411 772 aa3.71□□□□□ -1.82
TRM1YDR120C SMA2Q04658 369 aa3.71□□□□□ -1.82
TRM1YDR120C ECM7Q06200 448 aa3.71□□□□□ -1.82
TRM1YDR120C ERV2Q12284 196 aa3.71□□□□□ -1.82
TRM1YDR120C NCA2Q12374 616 aa3.71□□□□□ -1.82
TRM1YDR120C TFB5Q3E7C1 72 aaPredicted RBP3.71□□□□□ -1.82
TRM1YDR120C SRN2Q99176 213 aa3.71□□□□□ -1.82
TRM1YDR120C OPI3P05375 206 aa3.7□□□□□ -1.82
TRM1YDR120C YCL068CP25593 260 aa3.7□□□□□ -1.82
TRM1YDR120C SDH3P33421 198 aa3.7□□□□□ -1.82
TRM1YDR120C PMT5P52867 743 aa3.7□□□□□ -1.82
TRM1YDR120C RTT102P53330 157 aa3.7□□□□□ -1.82
TRM1YDR120C CCE1Q03702 353 aa3.7□□□□□ -1.82
TRM1YDR120C PBA1Q05778 276 aa3.7□□□□□ -1.82
TRM1YDR120C PDR18P53756 1333 aa3.7□□□□□ -1.82
TRM1YDR120C TPM1P17536 199 aaKnown RBP3.7□□□□□ -1.82
TRM1YDR120C RRP1P35178 278 aaPredicted RBP3.7□□□□□ -1.82
TRM1YDR120C CHK1P38147 527 aa3.7□□□□□ -1.82
TRM1YDR120C KAP104P38217 918 aaKnown RBP3.7□□□□□ -1.82
TRM1YDR120C STE24P47154 453 aa3.7□□□□□ -1.82
TRM1YDR120C TOS2P50078 622 aa3.7□□□□□ -1.82
TRM1YDR120C MTM1P53320 366 aa3.7□□□□□ -1.82
TRM1YDR120C YDR286CQ05530 114 aa3.7□□□□□ -1.82
TRM1YDR120C TSR1Q07381 788 aaKnown RBP3.7□□□□□ -1.82
TRM1YDR120C NOP6Q07623 225 aaKnown RBP3.7□□□□□ -1.82
TRM1YDR120C CEX1Q12453 761 aa3.7□□□□□ -1.82
TRM1YDR120C YDR524C-BQ3E6R4 66 aa3.7□□□□□ -1.82
TRM1YDR120C ECM29P38737 1868 aa3.69□□□□□ -1.82
TRM1YDR120C TRP1P00912 224 aa3.69□□□□□ -1.82
TRM1YDR120C CYC3P06182 269 aa3.69□□□□□ -1.82
TRM1YDR120C ATP1P07251 545 aaKnown RBP3.69□□□□□ -1.82
TRM1YDR120C SPT15P13393 240 aaKnown RBP3.69□□□□□ -1.82
TRM1YDR120C PHO84P25297 587 aaKnown RBP3.69□□□□□ -1.82
TRM1YDR120C SLM5P25345 492 aaKnown RBP3.69□□□□□ -1.82
TRM1YDR120C FAA1P30624 700 aaKnown RBP3.69□□□□□ -1.82
TRM1YDR120C RFS1P38234 210 aaKnown RBP3.69□□□□□ -1.82
TRM1YDR120C PHO88P38264 188 aaPredicted RBP3.69□□□□□ -1.82
TRM1YDR120C YHR131CP38835 850 aa3.69□□□□□ -1.82
TRM1YDR120C CCT4P39078 528 aaKnown RBP3.69□□□□□ -1.82
TRM1YDR120C ELP3Q02908 557 aaKnown RBP3.69□□□□□ -1.82
TRM1YDR120C TLG2Q08144 397 aa3.69□□□□□ -1.82
TRM1YDR120C PGC1Q08959 321 aa3.69□□□□□ -1.82
TRM1YDR120C YDR034W-BQ6Q5X2 51 aa3.69□□□□□ -1.82
TRM1YDR120C CAP2P13517 287 aa3.68□□□□□ -1.82
TRM1YDR120C POX1P13711 748 aa3.68□□□□□ -1.82
TRM1YDR120C EXG1P23776 448 aaKnown RBP3.68□□□□□ -1.82
TRM1YDR120C COX13P32799 129 aa3.68□□□□□ -1.82
TRM1YDR120C YBL059WP34224 193 aa3.68□□□□□ -1.82
TRM1YDR120C SIF2P38262 535 aa3.68□□□□□ -1.82
TRM1YDR120C SPP381P38282 291 aaPredicted RBP3.68□□□□□ -1.82
TRM1YDR120C HER2Q03557 464 aa3.68□□□□□ -1.82
TRM1YDR120C AAD15Q08361 143 aa3.68□□□□□ -1.82
TRM1YDR120C YOR387CQ08910 206 aa3.68□□□□□ -1.82
TRM1YDR120C HHF1P02309 103 aaKnown RBP3.67□□□□□ -1.82
TRM1YDR120C CBS2P14905 389 aa3.67□□□□□ -1.82
TRM1YDR120C UBA1P22515 1024 aaKnown RBP3.67□□□□□ -1.82
TRM1YDR120C PHA2P32452 334 aa3.67□□□□□ -1.82
TRM1YDR120C KAR9P32526 644 aa3.67□□□□□ -1.82
TRM1YDR120C SKT5P34226 696 aa3.67□□□□□ -1.82
TRM1YDR120C NDT80P38830 627 aa3.67□□□□□ -1.82
TRM1YDR120C YHR177WP38867 453 aa3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms