RNA–Protein interactions for RNA: YDL154W

MSH5, Transcript of Protein of the MutS family, yeastyeast

Gene MSH5, Length 2,706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH5YDL154W SPT10P35208 640 aa1.53□□□□□ -2.16
MSH5YDL154W PTH1P38876 190 aaKnown RBP1.53□□□□□ -2.16
MSH5YDL154W POP2P39008 433 aa1.53□□□□□ -2.16
MSH5YDL154W COX14P39103 70 aa1.53□□□□□ -2.16
MSH5YDL154W RRT5P43607 289 aa1.53□□□□□ -2.16
MSH5YDL154W ARK1P53974 638 aa1.53□□□□□ -2.16
MSH5YDL154W SRL2Q12020 392 aa1.53□□□□□ -2.16
MSH5YDL154W ARF1P11076 181 aaKnown RBP1.53□□□□□ -2.16
MSH5YDL154W HEM15P16622 393 aa1.53□□□□□ -2.16
MSH5YDL154W ANP1P32629 500 aa1.53□□□□□ -2.16
MSH5YDL154W YSC83P32792 385 aa1.53□□□□□ -2.16
MSH5YDL154W YBL059WP34224 193 aa1.53□□□□□ -2.16
MSH5YDL154W SPP381P38282 291 aaPredicted RBP1.53□□□□□ -2.16
MSH5YDL154W YIL067CP40514 678 aa1.53□□□□□ -2.16
MSH5YDL154W YPS6P40583 537 aa1.53□□□□□ -2.16
MSH5YDL154W CUE3P53137 624 aaKnown RBP1.53□□□□□ -2.16
MSH5YDL154W YGR016WP53209 190 aa1.53□□□□□ -2.16
MSH5YDL154W YMR181CQ03231 154 aa1.53□□□□□ -2.16
MSH5YDL154W URH1Q04179 340 aa1.53□□□□□ -2.16
MSH5YDL154W BCH1Q05029 724 aa1.53□□□□□ -2.16
MSH5YDL154W YDR341CQ05506 607 aaKnown RBP1.53□□□□□ -2.16
MSH5YDL154W PBA1Q05778 276 aa1.53□□□□□ -2.16
MSH5YDL154W IPK1Q06667 281 aa1.53□□□□□ -2.16
MSH5YDL154W HNT3Q08702 217 aa1.53□□□□□ -2.16
MSH5YDL154W YRM1Q12340 786 aa1.53□□□□□ -2.16
MSH5YDL154W EAF3Q12432 401 aa1.53□□□□□ -2.16
MSH5YDL154W IRA2P19158 3079 aa1.53□□□□□ -2.17
MSH5YDL154W SDH3P33421 198 aa1.53□□□□□ -2.17
MSH5YDL154W PAD1P33751 242 aaKnown RBP RIP-Chip data1.53□□□□□ -2.17not detected
MSH5YDL154W MIX23P38162 196 aa1.53□□□□□ -2.17
MSH5YDL154W ECM8P38246 354 aa1.53□□□□□ -2.17
MSH5YDL154W YSW1P38280 609 aa1.53□□□□□ -2.17
MSH5YDL154W FAA2P39518 744 aa1.53□□□□□ -2.17
MSH5YDL154W MAM33P40513 266 aa1.53□□□□□ -2.17
MSH5YDL154W RPA34P47006 233 aaPredicted RBP1.53□□□□□ -2.17
MSH5YDL154W COS10P52924 374 aa1.53□□□□□ -2.17
MSH5YDL154W MPS2P53159 387 aa1.53□□□□□ -2.17
MSH5YDL154W PRM1P53835 661 aa1.53□□□□□ -2.17
MSH5YDL154W TOF1P53840 1238 aa1.53□□□□□ -2.17
MSH5YDL154W AQR1P53943 586 aa1.53□□□□□ -2.17
MSH5YDL154W MTQ1P53944 314 aa1.53□□□□□ -2.17
MSH5YDL154W HER2Q03557 464 aa1.53□□□□□ -2.17
MSH5YDL154W ECM7Q06200 448 aa1.53□□□□□ -2.17
MSH5YDL154W TSR1Q07381 788 aaKnown RBP1.53□□□□□ -2.17
MSH5YDL154W CUE5Q08412 411 aaKnown RBP1.53□□□□□ -2.17
MSH5YDL154W TPT1Q12272 230 aaKnown RBP1.53□□□□□ -2.17
MSH5YDL154W RMD5Q12508 421 aa1.53□□□□□ -2.17
MSH5YDL154W NBL1Q3E7Y6 73 aa1.53□□□□□ -2.17
MSH5YDL154W YBR298C-AQ8TGK4 73 aa1.53□□□□□ -2.17
MSH5YDL154W YCL021W-AQ96VH3 125 aa1.53□□□□□ -2.17
MSH5YDL154W TRP1P00912 224 aa1.52□□□□□ -2.17
MSH5YDL154W DAL2P25335 343 aa1.52□□□□□ -2.17
MSH5YDL154W GEX1P25596 615 aa1.52□□□□□ -2.17
MSH5YDL154W CPR3P25719 182 aa1.52□□□□□ -2.17
MSH5YDL154W RGT1P32862 1170 aa1.52□□□□□ -2.17
MSH5YDL154W PRM5P40476 318 aa1.52□□□□□ -2.17
MSH5YDL154W IDP2P41939 412 aa1.52□□□□□ -2.17
MSH5YDL154W YGR117CP53270 476 aa1.52□□□□□ -2.17
MSH5YDL154W RTT102P53330 157 aa1.52□□□□□ -2.17
MSH5YDL154W NUP116Q02630 1113 aa1.52□□□□□ -2.17
MSH5YDL154W YMR310CQ04867 317 aaPredicted RBP1.52□□□□□ -2.17
MSH5YDL154W YDR286CQ05530 114 aa1.52□□□□□ -2.17
MSH5YDL154W ASA1Q06822 443 aa1.52□□□□□ -2.17
MSH5YDL154W YOR387CQ08910 206 aa1.52□□□□□ -2.17
MSH5YDL154W SKS1Q12505 502 aa1.52□□□□□ -2.17
MSH5YDL154W MNS1P32906 549 aa1.52□□□□□ -2.17
MSH5YDL154W UIP5P36137 443 aa1.52□□□□□ -2.17
MSH5YDL154W STP2P38704 541 aa1.52□□□□□ -2.17
MSH5YDL154W TOS3P43637 560 aa1.52□□□□□ -2.17
MSH5YDL154W PRM6Q04705 352 aa1.52□□□□□ -2.17
MSH5YDL154W DBP9Q06218 594 aaKnown RBP1.52□□□□□ -2.17
MSH5YDL154W NDL1Q06568 189 aa1.52□□□□□ -2.17
MSH5YDL154W KRE5P22023 1365 aa1.51□□□□□ -2.17
MSH5YDL154W POP5P28005 173 aa1.51□□□□□ -2.17
MSH5YDL154W ITR1P30605 584 aa1.51□□□□□ -2.17
MSH5YDL154W RAD5P32849 1169 aaPredicted RBP1.51□□□□□ -2.17
MSH5YDL154W SKT5P34226 696 aa1.51□□□□□ -2.17
MSH5YDL154W EBP2P36049 427 aaKnown RBP1.51□□□□□ -2.17
MSH5YDL154W SIF2P38262 535 aa1.51□□□□□ -2.17
MSH5YDL154W TIF5P38431 405 aaKnown RBP1.51□□□□□ -2.17
MSH5YDL154W GEP4P38812 185 aa1.51□□□□□ -2.17
MSH5YDL154W YHR218WP38899 603 aa1.51□□□□□ -2.17
MSH5YDL154W MLH1P38920 769 aa1.51□□□□□ -2.17
MSH5YDL154W CHS6P40955 746 aa1.51□□□□□ -2.17
MSH5YDL154W HAC1P41546 238 aa1.51□□□□□ -2.17
MSH5YDL154W FYV8P46949 817 aaKnown RBP1.51□□□□□ -2.17
MSH5YDL154W HST1P53685 503 aa1.51□□□□□ -2.17
MSH5YDL154W HXT11P54862 567 aa1.51□□□□□ -2.17
MSH5YDL154W SPH1Q06160 661 aa1.51□□□□□ -2.17
MSH5YDL154W PIS1P06197 220 aaKnown RBP1.51□□□□□ -2.17
MSH5YDL154W PHO2P07269 559 aa1.51□□□□□ -2.17
MSH5YDL154W SCH9P11792 824 aaKnown RBP1.51□□□□□ -2.17
MSH5YDL154W CAP2P13517 287 aa1.51□□□□□ -2.17
MSH5YDL154W PET123P17558 318 aa1.51□□□□□ -2.17
MSH5YDL154W EXG1P23776 448 aaKnown RBP1.51□□□□□ -2.17
MSH5YDL154W ADH5P38113 351 aaKnown RBP1.51□□□□□ -2.17
MSH5YDL154W CWC25P53854 179 aaKnown RBP1.51□□□□□ -2.17
MSH5YDL154W SNT309Q06091 175 aaPredicted RBP1.51□□□□□ -2.17
MSH5YDL154W LDS2Q08218 356 aa1.51□□□□□ -2.17
MSH5YDL154W HMS1Q12398 434 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms