RNA–Protein interactions for RNA: YBR235W

VHC1, Transcript of Vacuolar membrane cation-chloride cotransporter (CCC), yeastyeast

Gene VHC1, Length 3,363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHC1YBR235W YOR019WQ99248 730 aa4.41□□□□□ -1.7
VHC1YBR235W APC1P53886 1748 aa4.41□□□□□ -1.7
VHC1YBR235W CAR1P00812 333 aaKnown RBP4.4□□□□□ -1.7
VHC1YBR235W GAL80P04387 435 aa4.4□□□□□ -1.7
VHC1YBR235W PRE1P22141 198 aaKnown RBP4.4□□□□□ -1.7
VHC1YBR235W RPI1P23250 407 aaKnown RBP4.4□□□□□ -1.7
VHC1YBR235W YCL002CP25565 263 aa4.4□□□□□ -1.7
VHC1YBR235W URA7P28274 579 aaKnown RBP4.4□□□□□ -1.7
VHC1YBR235W TRK2P28584 889 aa4.4□□□□□ -1.7
VHC1YBR235W ERG1P32476 496 aaKnown RBP4.4□□□□□ -1.7
VHC1YBR235W YKR051WP36142 418 aa4.4□□□□□ -1.7
VHC1YBR235W MRPL4P36517 319 aa4.4□□□□□ -1.7
VHC1YBR235W RIM2P38127 377 aa4.4□□□□□ -1.7
VHC1YBR235W IPT1P38954 527 aa4.4□□□□□ -1.7
VHC1YBR235W SLS1P42900 643 aa4.4□□□□□ -1.7
VHC1YBR235W NSA1P53136 463 aaPredicted RBP4.4□□□□□ -1.7
VHC1YBR235W DIA1P54005 336 aa4.4□□□□□ -1.7
VHC1YBR235W MRP51Q02950 344 aa4.4□□□□□ -1.7
VHC1YBR235W CCE1Q03702 353 aa4.4□□□□□ -1.7
VHC1YBR235W CGI121Q03705 181 aaKnown RBP4.4□□□□□ -1.7
VHC1YBR235W YPL199CQ08954 240 aa4.4□□□□□ -1.7
VHC1YBR235W INP53Q12271 1107 aa4.4□□□□□ -1.7
VHC1YBR235W RIB3Q99258 208 aa4.4□□□□□ -1.7
VHC1YBR235W CKS1P20486 150 aaKnown RBP4.4□□□□□ -1.7
VHC1YBR235W BUD5P25300 642 aaPredicted RBP4.4□□□□□ -1.7
VHC1YBR235W RBK1P25332 333 aa4.4□□□□□ -1.7
VHC1YBR235W COQ3P27680 312 aa4.4□□□□□ -1.7
VHC1YBR235W SSH4P32343 579 aa4.4□□□□□ -1.7
VHC1YBR235W SPS19P32573 292 aaKnown RBP4.4□□□□□ -1.7
VHC1YBR235W NTC20P38302 140 aaPredicted RBP4.4□□□□□ -1.7
VHC1YBR235W FAA3P39002 694 aa4.4□□□□□ -1.7
VHC1YBR235W NPR2P39923 615 aa4.4□□□□□ -1.7
VHC1YBR235W YIL161WP40449 235 aaKnown RBP4.4□□□□□ -1.7
VHC1YBR235W GLC8P41818 229 aa4.4□□□□□ -1.7
VHC1YBR235W IRC7P43623 340 aa4.4□□□□□ -1.7
VHC1YBR235W RHO4Q00246 291 aa4.4□□□□□ -1.7
VHC1YBR235W TVP18Q04767 167 aa4.4□□□□□ -1.7
VHC1YBR235W YLR225CQ05948 407 aaKnown RBP4.4□□□□□ -1.7
VHC1YBR235W PML1Q07930 204 aaPredicted RBP4.4□□□□□ -1.7
VHC1YBR235W PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.4□□□□□ -1.7not detected
VHC1YBR235W Q0142Q9ZZW4 58 aa4.4□□□□□ -1.7
VHC1YBR235W SPO7P18410 259 aa4.4□□□□□ -1.71
VHC1YBR235W ART10P18634 518 aaKnown RBP4.4□□□□□ -1.71
VHC1YBR235W CSM1P25651 190 aa4.4□□□□□ -1.71
VHC1YBR235W SNC1P31109 117 aa4.4□□□□□ -1.71
VHC1YBR235W PRO3P32263 286 aaKnown RBP4.4□□□□□ -1.71
VHC1YBR235W CAT2P32796 670 aaKnown RBP4.4□□□□□ -1.71
VHC1YBR235W SUR2P38992 349 aa4.4□□□□□ -1.71
VHC1YBR235W BDH1P39714 382 aa4.4□□□□□ -1.71
VHC1YBR235W GIP2P40036 548 aa4.4□□□□□ -1.71
VHC1YBR235W SSU1P41930 458 aa4.4□□□□□ -1.71
VHC1YBR235W YPR003CP53394 754 aa4.4□□□□□ -1.71
VHC1YBR235W ROD1Q02805 837 aa4.4□□□□□ -1.71
VHC1YBR235W YPL080CQ02826 108 aa4.4□□□□□ -1.71
VHC1YBR235W SHH3Q04487 196 aa4.4□□□□□ -1.71
VHC1YBR235W RRG7Q08774 242 aaPredicted RBP4.4□□□□□ -1.71
VHC1YBR235W KEL3Q08979 651 aaPredicted RBP4.4□□□□□ -1.71
VHC1YBR235W RPS9AO13516 197 aaKnown RBP4.39□□□□□ -1.71
VHC1YBR235W RPS9BP05755 195 aaKnown RBP4.39□□□□□ -1.71
VHC1YBR235W MSS18P08593 268 aa4.39□□□□□ -1.71
VHC1YBR235W HOP1P20050 605 aa4.39□□□□□ -1.71
VHC1YBR235W ACB1P31787 87 aa4.39□□□□□ -1.71
VHC1YBR235W MSN2P33748 704 aa4.39□□□□□ -1.71
VHC1YBR235W WBP1P33767 430 aaKnown RBP4.39□□□□□ -1.71
VHC1YBR235W SRB2P34162 210 aa4.39□□□□□ -1.71
VHC1YBR235W TCD2P36101 447 aaKnown RBP4.39□□□□□ -1.71
VHC1YBR235W IKI1P38874 309 aa4.39□□□□□ -1.71
VHC1YBR235W SOP4P39543 234 aaPredicted RBP4.39□□□□□ -1.71
VHC1YBR235W UTP7P40055 554 aaKnown RBP4.39□□□□□ -1.71
VHC1YBR235W COG3P40094 801 aa4.39□□□□□ -1.71
VHC1YBR235W PGD1P40356 397 aa4.39□□□□□ -1.71
VHC1YBR235W HIS6P40545 261 aa4.39□□□□□ -1.71
VHC1YBR235W YGL159WP53110 370 aa4.39□□□□□ -1.71
VHC1YBR235W SCW11P53189 542 aa4.39□□□□□ -1.71
VHC1YBR235W NMA111P53920 997 aa4.39□□□□□ -1.71
VHC1YBR235W NAM8Q00539 523 aaKnown RBP4.39□□□□□ -1.71
VHC1YBR235W BCH1Q05029 724 aa4.39□□□□□ -1.71
VHC1YBR235W MSC3Q05812 728 aa4.39□□□□□ -1.71
VHC1YBR235W MFG1Q07684 458 aa4.39□□□□□ -1.71
VHC1YBR235W PPM2Q08282 695 aa4.39□□□□□ -1.71
VHC1YBR235W MHT1Q12525 324 aa4.39□□□□□ -1.71
VHC1YBR235W RIF1P29539 1916 aa4.39□□□□□ -1.71
VHC1YBR235W ATG8P38182 117 aaRIP-Chip data4.39□□□□□ -1.71not detected
VHC1YBR235W MBA1P38300 278 aa4.39□□□□□ -1.71
VHC1YBR235W APM2P38700 605 aa4.39□□□□□ -1.71
VHC1YBR235W HPA3P39979 161 aa4.39□□□□□ -1.71
VHC1YBR235W GET2P40056 285 aa4.39□□□□□ -1.71
VHC1YBR235W YGR201CP42936 225 aa4.39□□□□□ -1.71
VHC1YBR235W DPB11P47027 764 aaPredicted RBP4.39□□□□□ -1.71
VHC1YBR235W YAE1P47118 141 aaPredicted RBP4.39□□□□□ -1.71
VHC1YBR235W AZR1P50080 613 aa4.39□□□□□ -1.71
VHC1YBR235W YGL185CP53100 379 aa4.39□□□□□ -1.71
VHC1YBR235W STR3P53101 465 aaKnown RBP4.39□□□□□ -1.71
VHC1YBR235W PEX31P53203 462 aa4.39□□□□□ -1.71
VHC1YBR235W SSU72P53538 206 aaPredicted RBP4.39□□□□□ -1.71
VHC1YBR235W CUS2P53830 285 aaPredicted RBP4.39□□□□□ -1.71
VHC1YBR235W PKR1Q03880 122 aaKnown RBP4.39□□□□□ -1.71
VHC1YBR235W NAT4Q04751 285 aa4.39□□□□□ -1.71
VHC1YBR235W YLL058WQ12198 575 aa4.39□□□□□ -1.71
VHC1YBR235W RDL1Q12305 139 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms