RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W YLH47Q06493 454 aa1.93□□□□□ -2.1
SNC1YAL030W ARR1Q06596 294 aa1.93□□□□□ -2.1
SNC1YAL030W YLR413WQ06689 675 aa1.93□□□□□ -2.1
SNC1YAL030W VAC14Q06708 880 aa1.93□□□□□ -2.1
SNC1YAL030W SHS1Q07657 551 aa1.93□□□□□ -2.1
SNC1YAL030W LOT6Q07923 191 aa1.93□□□□□ -2.1
SNC1YAL030W ALE1Q08548 619 aa1.93□□□□□ -2.1
SNC1YAL030W ESA1Q08649 445 aa1.93□□□□□ -2.1
SNC1YAL030W PPT2Q12036 173 aa1.93□□□□□ -2.1
SNC1YAL030W YLR108CQ12259 485 aa1.93□□□□□ -2.1
SNC1YAL030W APC2Q12440 853 aa1.93□□□□□ -2.1
SNC1YAL030W MCK1P21965 375 aaKnown RBP1.92□□□□□ -2.1
SNC1YAL030W DCC1P25559 380 aa1.92□□□□□ -2.1
SNC1YAL030W MXR2P25566 168 aa1.92□□□□□ -2.1
SNC1YAL030W ATS1P31386 333 aa1.92□□□□□ -2.1
SNC1YAL030W YPS1P32329 569 aa1.92□□□□□ -2.1
SNC1YAL030W RAD5P32849 1169 aaPredicted RBP1.92□□□□□ -2.1
SNC1YAL030W SDH3P33421 198 aa1.92□□□□□ -2.1
SNC1YAL030W TIR2P33890 251 aa1.92□□□□□ -2.1
SNC1YAL030W IST2P38250 946 aa1.92□□□□□ -2.1
SNC1YAL030W GEP4P38812 185 aa1.92□□□□□ -2.1
SNC1YAL030W SBE22P38814 852 aa1.92□□□□□ -2.1
SNC1YAL030W BTT1P40314 149 aaPredicted RBP1.92□□□□□ -2.1
SNC1YAL030W PRM5P40476 318 aa1.92□□□□□ -2.1
SNC1YAL030W INA22P40576 216 aa1.92□□□□□ -2.1
SNC1YAL030W KEG1P43614 200 aa1.92□□□□□ -2.1
SNC1YAL030W AIP1P46680 615 aaKnown RBP1.92□□□□□ -2.1
SNC1YAL030W ABM1P47146 123 aa1.92□□□□□ -2.1
SNC1YAL030W ALF1P53904 254 aa1.92□□□□□ -2.1
SNC1YAL030W HXT11P54862 567 aa1.92□□□□□ -2.1
SNC1YAL030W YML122CQ03207 126 aa1.92□□□□□ -2.1
SNC1YAL030W RVB1Q03940 463 aaKnown RBP1.92□□□□□ -2.1
SNC1YAL030W SMP3Q04174 516 aa1.92□□□□□ -2.1
SNC1YAL030W APC4Q04601 652 aa1.92□□□□□ -2.1
SNC1YAL030W ERV41Q04651 352 aa1.92□□□□□ -2.1
SNC1YAL030W RRN11Q04712 507 aa1.92□□□□□ -2.1
SNC1YAL030W NAT4Q04751 285 aa1.92□□□□□ -2.1
SNC1YAL030W APC5Q08683 685 aa1.92□□□□□ -2.1
SNC1YAL030W AHC1Q12433 566 aa1.92□□□□□ -2.1
SNC1YAL030W PCL9Q12477 304 aa1.92□□□□□ -2.1
SNC1YAL030W YBR298C-AQ8TGK4 73 aa1.92□□□□□ -2.1
SNC1YAL030W PIS1P06197 220 aaKnown RBP1.91□□□□□ -2.1
SNC1YAL030W GDH1P07262 454 aaKnown RBP1.91□□□□□ -2.1
SNC1YAL030W GAL7P08431 366 aa1.91□□□□□ -2.1
SNC1YAL030W UGA1P17649 471 aa1.91□□□□□ -2.1
SNC1YAL030W ARF2P19146 181 aaKnown RBP1.91□□□□□ -2.1
SNC1YAL030W RBK1P25332 333 aa1.91□□□□□ -2.1
SNC1YAL030W RPL5P26321 297 aaKnown RBP1.91□□□□□ -2.1
SNC1YAL030W CIN8P27895 1000 aa1.91□□□□□ -2.1
SNC1YAL030W ACB1P31787 87 aa1.91□□□□□ -2.1
SNC1YAL030W ZUO1P32527 433 aaKnown RBP1.91□□□□□ -2.1
SNC1YAL030W TMT1P32643 299 aa1.91□□□□□ -2.1
SNC1YAL030W BUD2P33314 1104 aa1.91□□□□□ -2.1
SNC1YAL030W PAD1P33751 242 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
SNC1YAL030W YPT53P36019 220 aa1.91□□□□□ -2.1
SNC1YAL030W YKR015CP36111 568 aa1.91□□□□□ -2.1
SNC1YAL030W YHR182WP38870 785 aa1.91□□□□□ -2.1
SNC1YAL030W RBG1P39729 369 aa1.91□□□□□ -2.1
SNC1YAL030W UTP25P40498 721 aaKnown RBP1.91□□□□□ -2.1
SNC1YAL030W YIL029CP40538 142 aa1.91□□□□□ -2.1
SNC1YAL030W SEC27P41811 889 aaKnown RBP1.91□□□□□ -2.1
SNC1YAL030W GTO1P48239 356 aa1.91□□□□□ -2.1
SNC1YAL030W TRF5P48561 642 aaKnown RBP1.91□□□□□ -2.1
SNC1YAL030W TAF6P53040 516 aa1.91□□□□□ -2.1
SNC1YAL030W LST7P53237 242 aa1.91□□□□□ -2.1
SNC1YAL030W GOR1P53839 350 aa1.91□□□□□ -2.1
SNC1YAL030W YMR102CQ03177 834 aa1.91□□□□□ -2.1
SNC1YAL030W YMR111CQ04461 462 aaPredicted RBP1.91□□□□□ -2.1
SNC1YAL030W YMR317WQ04893 1140 aa1.91□□□□□ -2.1
SNC1YAL030W MRPL35Q06678 367 aa1.91□□□□□ -2.1
SNC1YAL030W YDL114WQ07530 308 aa1.91□□□□□ -2.1
SNC1YAL030W SMC5Q08204 1093 aa1.91□□□□□ -2.1
SNC1YAL030W ERV2Q12284 196 aa1.91□□□□□ -2.1
SNC1YAL030W LDB17Q12342 491 aa1.91□□□□□ -2.1
SNC1YAL030W EAF3Q12432 401 aa1.91□□□□□ -2.1
SNC1YAL030W YOR338WQ99326 363 aa1.91□□□□□ -2.1
SNC1YAL030W TRP1P00912 224 aa1.9□□□□□ -2.11
SNC1YAL030W CYC3P06182 269 aa1.9□□□□□ -2.11
SNC1YAL030W CAR2P07991 424 aaKnown RBP1.9□□□□□ -2.11
SNC1YAL030W SSA3P09435 649 aaKnown RBP1.9□□□□□ -2.11
SNC1YAL030W RPL18AP0CX49 186 aaKnown RBP1.9□□□□□ -2.11
SNC1YAL030W RPL18BP0CX50 186 aaKnown RBP1.9□□□□□ -2.11
SNC1YAL030W RPB5P20434 215 aa1.9□□□□□ -2.11
SNC1YAL030W UTR1P21373 530 aa1.9□□□□□ -2.11
SNC1YAL030W CPR4P25334 318 aa1.9□□□□□ -2.11
SNC1YAL030W ARO2P28777 376 aaKnown RBP1.9□□□□□ -2.11
SNC1YAL030W FUN26P31381 517 aa1.9□□□□□ -2.11
SNC1YAL030W VMA5P31412 392 aaKnown RBP1.9□□□□□ -2.11
SNC1YAL030W PRO3P32263 286 aaKnown RBP1.9□□□□□ -2.11
SNC1YAL030W AGA1P32323 725 aa1.9□□□□□ -2.11
SNC1YAL030W DPH5P32469 300 aaPredicted RBP1.9□□□□□ -2.11
SNC1YAL030W RPC25P35718 212 aa1.9□□□□□ -2.11
SNC1YAL030W YHK8P38776 514 aa1.9□□□□□ -2.11
SNC1YAL030W YHR218WP38899 603 aa1.9□□□□□ -2.11
SNC1YAL030W SPT8P38915 602 aa1.9□□□□□ -2.11
SNC1YAL030W MAM33P40513 266 aa1.9□□□□□ -2.11
SNC1YAL030W YFL067WP43537 175 aa1.9□□□□□ -2.11
SNC1YAL030W NCA3P46955 337 aa1.9□□□□□ -2.11
SNC1YAL030W COX16P47081 118 aa1.9□□□□□ -2.11
SNC1YAL030W MRM2P53123 320 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 56.2 ms