RNA–Protein interactions for RNA: ENST00000641455.1

PHGDH-217, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 312 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-217ENST00000641455 RRN3P2A6NIE6 340 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 KLRF2D3W0D1 207 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 MGEA5O60502 916 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 CLASP2O75122 1294 aaKnown RBP9.04□□□□□ -0.96
PHGDH-217ENST00000641455 RPS6KA5O75582 802 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 CFHP08603 1231 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 INSRRP14616 1297 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 PDE4AP27815 886 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 PPM1AP35813 382 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 PBX3P40426 434 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 KRT76Q01546 638 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 PLCB3Q01970 1234 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 TRAF1Q13077 416 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 BMS1Q14692 1282 aaKnown RBP9.04□□□□□ -0.96
PHGDH-217ENST00000641455 MCMDC2Q4G0Z9 681 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 MARCH8Q5T0T0 291 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 KIAA0319Q5VV43 1072 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 KANK3Q6NY19 840 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 KCNT2Q6UVM3 1135 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 CCDC149Q6ZUS6 474 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 ABI1Q8IZP0 508 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 STAG2Q8N3U4 1231 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 GIMAP8Q8ND71 665 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-217ENST00000641455 OTUD7AQ8TE49 926 aaPredicted RBP9.04□□□□□ -0.96
PHGDH-217ENST00000641455 FAM227BQ96M60 508 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 SMARCAD1Q9H4L7 1026 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 CWH43Q9H720 699 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 C1orf112Q9NSG2 853 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 DZANK1Q9NVP4 752 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 DUSP12Q9UNI6 340 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 USTQ9Y2C2 406 aa9.04□□□□□ -0.96
PHGDH-217ENST00000641455 MAP1BP46821 2468 aaKnown RBP9.04□□□□□ -0.96
PHGDH-217ENST00000641455 A0A0D9SFI3 127 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 C2orf71A6NGG8 1288 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 B4E1Z4 1266 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 KINO60870 393 aaKnown RBP9.03□□□□□ -0.96
PHGDH-217ENST00000641455 MX1P20591 662 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 SDHBP21912 280 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 HNRNPUQ00839 825 aaKnown RBP eCLIP9.03□□□□□ -0.96
PHGDH-217ENST00000641455 ODR4Q5SWX8 454 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 TMC5Q6UXY8 1006 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 SLC24A5Q71RS6 500 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 OTOP3Q7RTS5 596 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 ENAHQ8N8S7 591 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-217ENST00000641455 SMARCC2Q8TAQ2 1214 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 TRAPPC12Q8WVT3 735 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 SEPT1Q8WYJ6 367 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 PIGSQ96S52 555 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 ZSCAN10Q96SZ4 725 aaPredicted RBP9.03□□□□□ -0.96
PHGDH-217ENST00000641455 SENP7Q9BQF6 1050 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 UBAC1Q9BSL1 405 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 DCTPP1Q9H773 170 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 TBC1D17Q9HA65 648 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 SPG21Q9NZD8 308 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 CDV3Q9UKY7 258 aaKnown RBP9.03□□□□□ -0.96
PHGDH-217ENST00000641455 CA14Q9ULX7 337 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 ZMYM6O95789 1325 aa9.03□□□□□ -0.96
PHGDH-217ENST00000641455 BAZ2BQ9UIF8 2168 aaKnown RBP9.02□□□□□ -0.97
PHGDH-217ENST00000641455 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.02□□□□□ -0.97
PHGDH-217ENST00000641455 GSTTP1A0A1W2PQM5 241 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 ZNF213O14771 459 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 NARSO43776 548 aaKnown RBP9.02□□□□□ -0.97
PHGDH-217ENST00000641455 CXCL14O95715 111 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 DCNP07585 359 aaKnown RBP9.02□□□□□ -0.97
PHGDH-217ENST00000641455 SP9P0CG40 484 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 EPCAMP16422 314 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 ATXN1P54253 815 aaKnown RBP9.02□□□□□ -0.97
PHGDH-217ENST00000641455 TBC1D8BQ0IIM8 1120 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 IFIT1BQ5T764 474 aaKnown RBP9.02□□□□□ -0.97
PHGDH-217ENST00000641455 CABP7Q86V35 215 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 LRRC43Q8N309 656 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 MRPL43Q8N983 215 aaKnown RBP9.02□□□□□ -0.97
PHGDH-217ENST00000641455 RNF169Q8NCN4 708 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 PIBF1Q8WXW3 757 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 TNPO1Q92973 898 aaKnown RBP9.02□□□□□ -0.97
PHGDH-217ENST00000641455 CUL5Q93034 780 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 EVI5LQ96CN4 794 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 PPP1R16BQ96T49 567 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 TMEM117Q9H0C3 514 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 AZI2Q9H6S1 392 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 KCNK12Q9HB15 430 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 RGS18Q9NS28 235 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 TMEM161AQ9NX61 479 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 NOC2LQ9Y3T9 749 aaKnown RBP9.02□□□□□ -0.97
PHGDH-217ENST00000641455 PCDHA2Q9Y5H9 948 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 FRMPD4Q14CM0 1322 aa9.02□□□□□ -0.97
PHGDH-217ENST00000641455 DCDC2BA2VCK2 349 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 C9IYK1 514 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 CCER2I3L3R5 266 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 GPR182O15218 404 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 HOXA2O43364 376 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 ATP9AO75110 1047 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 METAP2P50579 478 aaKnown RBP eCLIP9.01□□□□□ -0.97
PHGDH-217ENST00000641455 NMIQ13287 307 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-217ENST00000641455 PLCB4Q15147 1175 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 NONOQ15233 471 aaKnown RBP eCLIP9.01□□□□□ -0.97
PHGDH-217ENST00000641455 PCNX4Q63HM2 1172 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 DENND4AQ7Z401 1863 aa9.01□□□□□ -0.97
PHGDH-217ENST00000641455 ZNF589Q86UQ0 364 aaPredicted RBP9.01□□□□□ -0.97
PHGDH-217ENST00000641455 AUTS2Q8WXX7 1259 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms