RNA–Protein interactions for RNA: ENST00000639895.1

SPIN3-231, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 4,234 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-231	ENST00000639895	SPZ1	Q9BXG8	430 aa		12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	PFDN4	Q9NQP4	134 aa		12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	TECPR2	O15040	1411 aa		12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	AGL	P35573	1532 aa		12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	SH2B2	O14492	632 aa	Predicted RBP	12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	RTN2	O75298	545 aa		12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	PGM1	P36871	562 aa		12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	GJA8	P48165	433 aa		12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	PTDSS1	P48651	473 aa	Known RBP	12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	NAPA	P54920	295 aa		12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	ADAR	P55265	1226 aa	Known RBP	12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	AP2B1	P63010	937 aa		12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	SPARCL1	Q14515	664 aa		12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	C16orf87	Q6PH81	154 aa		12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	EPM2AIP1	Q7L775	607 aa	Predicted RBP	12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	MARCH10	Q8NA82	808 aa	Predicted RBP	12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	SMYD3	Q9H7B4	428 aa		12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	PNMA3	Q9UL41	463 aa		12.21	□□□□□ -0.45
SPIN3-231	ENST00000639895	NRK	Q7Z2Y5	1582 aa		12.21	□□□□□ -0.46
SPIN3-231	ENST00000639895	PRAMEF22	A3QJZ6	481 aa		12.21	□□□□□ -0.46
SPIN3-231	ENST00000639895	SRGN	P10124	158 aa		12.21	□□□□□ -0.46
SPIN3-231	ENST00000639895	STAT1	P42224	750 aa		12.21	□□□□□ -0.46
SPIN3-231	ENST00000639895	MMEL1	Q495T6	779 aa		12.21	□□□□□ -0.46
SPIN3-231	ENST00000639895	RGS9BP	Q6ZS82	235 aa		12.21	□□□□□ -0.46
SPIN3-231	ENST00000639895	USP6NL	Q92738	828 aa		12.21	□□□□□ -0.46
SPIN3-231	ENST00000639895	ANKAR	Q7Z5J8	1434 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	CDKAL1	Q5VV42	579 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	SCG3	Q8WXD2	468 aa	Known RBP	12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	TEKT1	Q969V4	418 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	GRAMD1A	Q96CP6	724 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	SLITRK6	Q9H5Y7	841 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	EBF2	Q9HAK2	575 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	MED23	Q9ULK4	1368 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	PRLR	P16471	622 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	SP100	P23497	879 aa	Predicted RBP	12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	PHB	P35232	272 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	TRADD	Q15628	312 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	LACTB2	Q53H82	288 aa	Predicted RBP	12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	KLC3	Q6P597	504 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	CABLES1	Q8TDN4	633 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	DNAJC7	Q99615	494 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	TUBB6	Q9BUF5	446 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	NUF2	Q9BZD4	464 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	PREB	Q9HCU5	417 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	CCNT1	O60563	726 aa	Known RBP	12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	VIL1	P09327	827 aa	Known RBP	12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	USP46	P62068	366 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	ERVK-9	P63128	1117 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	DPYD	Q12882	1025 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	R3HDM1	Q15032	1099 aa	Known RBP	12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	CLUL1	Q15846	466 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	ARHGAP44	Q17R89	818 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	RPGR	Q92834	1020 aa	Known RBP	12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	TRAPPC9	Q96Q05	1148 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	RXFP1	Q9HBX9	757 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	COPRS	Q9NQ92	184 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	USP40	Q9NVE5	1235 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	BTBD7	Q9P203	1132 aa		12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	USP42	Q9H9J4	1324 aa	Known RBP	12.2	□□□□□ -0.46
SPIN3-231	ENST00000639895	SRRM3	A6NNA2	597 aa	Predicted RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	ENTPD5	O75356	428 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	KLRC1	P26715	233 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	EPHB1	P54762	984 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	NCALD	P61601	193 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	KCNMA1	Q12791	1236 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	THOC5	Q13769	683 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	MAML1	Q92585	1016 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	HSD3B7	Q9H2F3	369 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	ANKRD26	Q9UPS8	1709 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	EXOC1L	A0A1B0GW35	172 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	RCCD1	A6NED2	376 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	MYL1	P05976	194 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	CALM1	P0DP23	149 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	CALM2	P0DP24	149 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	CALM3	P0DP25	149 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	IMPDH2	P12268	514 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	ATF2	P15336	505 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	CYP7A1	P22680	504 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	EPHB2	P29323	1055 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	LONP1	P36776	959 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	MLH1	P40692	756 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	ESRRG	P62508	458 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	IK	Q13123	557 aa	Predicted RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	DNAJC3	Q13217	504 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	RABGAP1L	Q5R372	815 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	HELB	Q8NG08	1087 aa	Predicted RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	ZCRB1	Q8TBF4	217 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	EPS8L3	Q8TE67	593 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	UIMC1	Q96RL1	719 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	NDEL1	Q9GZM8	345 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	PALMD	Q9NP74	551 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	SLC5A4	Q9NY91	659 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	HDAC9	Q9UKV0	1011 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	TMA7	Q9Y2S6	64 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	ZNF532	Q9HCE3	1301 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	ITSN1	Q15811	1721 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	LSM1	O15116	133 aa	Known RBP	12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	ZWINT	O95229	277 aa		12.19	□□□□□ -0.46
SPIN3-231	ENST00000639895	IFI35	P80217	286 aa	Predicted RBP	12.19	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms