RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 STAT1P42224 750 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 LACTBP83111 547 aaPredicted RBP8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 SLC7A5Q01650 507 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 DMP1Q13316 513 aaPredicted RBP8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 SKIV2LQ15477 1246 aaKnown RBP8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 MCF2L2Q86YR7 1114 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 CCDC105Q8IYK2 499 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 AK8Q96MA6 479 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 SMARCAL1Q9NZC9 954 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 SEPT10Q9P0V9 454 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 RASAL2Q9UJF2 1139 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 PRRC2BQ5JSZ5 2229 aaKnown RBP8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 USP17L10C9JJH3 530 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 RASA1P20936 1047 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 EIF4A3P38919 411 aaKnown RBP8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 SNRNP48Q6IEG0 339 aaKnown RBP8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 SND1Q7KZF4 910 aaKnown RBP eCLIP8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 PEX26Q7Z412 305 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 CCDC170Q8IYT3 715 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 TTC30BQ8N4P2 665 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 MED4Q9NPJ6 270 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 LCMT1Q9UIC8 334 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 BCL9LQ86UU0 1499 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 MYH14Q7Z406 1995 aaKnown RBP8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 EIF3CLB5ME19 914 aaKnown RBP8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 KIF4AO95239 1232 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 IVLP07476 585 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 NR2F2P24468 414 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 SYDE2Q5VT97 1194 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 PTF1AQ7RTS3 328 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 RETREG2Q8NC44 543 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 EIF3CQ99613 913 aaKnown RBP8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 NDST4Q9H3R1 872 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 CUEDC2Q9H467 287 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 NRBP2Q9NSY0 501 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 CNOT7Q9UIV1 285 aaKnown RBP8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 CACNA1SQ13698 1873 aa8.99□□□□□ -0.97
PTPDC1-204ENST00000620992 PALM3A6NDB9 673 aaPredicted RBP8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 MYO1CO00159 1063 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 PDE2AO00408 941 aaPredicted RBP8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 PRPHP41219 470 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 KIF11P52732 1056 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 CFAP58Q5T655 872 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 LIN9Q5TKA1 542 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 WDR93Q6P2C0 686 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 FOXR1Q6PIV2 292 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 ELP3Q9H9T3 547 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 PFDN4Q9NQP4 134 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 STIM2Q9P246 746 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 CAPN6Q9Y6Q1 641 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 ARAP2Q8WZ64 1704 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 STAMBPO95630 424 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 GGCXP38435 758 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 PSMD6Q15008 389 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 MUM1L1Q5H9M0 696 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 NFRKBQ6P4R8 1299 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 MICALL2Q8IY33 904 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 KIAA0895Q8NCT3 520 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 TRIM58Q8NG06 486 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 LARP4BQ92615 738 aaKnown RBP8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 TSGA10Q9BZW7 698 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 ZMYND12Q9H0C1 365 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 EHD2Q9NZN4 543 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 RRP15Q9Y3B9 282 aaKnown RBP8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 PCDHA13Q9Y5I0 950 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 COL4A3BPQ9Y5P4 624 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 GOLGA6BA6NDN3 693 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 F5H6K3 240 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 NCK2O43639 380 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 TDP2O95551 362 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 BCRP11274 1271 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 KLRC3Q07444 240 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 VWA3BQ502W6 1294 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 SFMBT2Q5VUG0 894 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 PAPD7Q5XG87 772 aaKnown RBP8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 NME8Q8N427 588 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 RAB3IL1Q8TBN0 382 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 RPGRIP1Q96KN7 1286 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 RASSF4Q9H2L5 321 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 SEMA6BQ9H3T3 888 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 PSD3Q9NYI0 1048 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 HESX1Q9UBX0 185 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 AFG3L2Q9Y4W6 797 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 PLCH1Q4KWH8 1693 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 MYMKA6NI61 221 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 LRRC53A6NM62 1247 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 EPHB6O15197 1021 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 MYBL2P10244 700 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 RASSF7Q02833 373 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 MEA1Q16626 185 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 TTBK2Q6IQ55 1244 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 HACE1Q8IYU2 909 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 COG1Q8WTW3 980 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 MAGEF1Q9HAY2 307 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 C1orf112Q9NSG2 853 aa8.98□□□□□ -0.97
PTPDC1-204ENST00000620992 M0R2N6 131 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 BUB1BO60566 1050 aaPredicted RBP8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 OSBPP22059 807 aa8.97□□□□□ -0.97
PTPDC1-204ENST00000620992 PEX3P56589 373 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms