RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 LRRC55Q6ZSA7 311 aa8□□□□□ -1.13
MUC1-227ENST00000615517 STOX1Q6ZVD7 989 aa8□□□□□ -1.13
MUC1-227ENST00000615517 CYFIP1Q7L576 1253 aa8□□□□□ -1.13
MUC1-227ENST00000615517 TMC7Q7Z402 723 aa8□□□□□ -1.13
MUC1-227ENST00000615517 ADGRF4Q8IZF3 695 aa8□□□□□ -1.13
MUC1-227ENST00000615517 MRPL43Q8N983 215 aaKnown RBP8□□□□□ -1.13
MUC1-227ENST00000615517 RSAD2Q8WXG1 361 aa8□□□□□ -1.13
MUC1-227ENST00000615517 TCP11L1Q9NUJ3 509 aa8□□□□□ -1.13
MUC1-227ENST00000615517 ZNF316A6NFI3 1004 aaPredicted RBP7.99□□□□□ -1.13
MUC1-227ENST00000615517 MAST4O15021 2626 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 SMARCA5O60264 1052 aaPredicted RBP7.99□□□□□ -1.13
MUC1-227ENST00000615517 N4BP1O75113 896 aaKnown RBP7.99□□□□□ -1.13
MUC1-227ENST00000615517 RAB11FIP3O75154 756 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 FGFR1P11362 822 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 LAG3P18627 525 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 PDE4AP27815 886 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 TMEM62Q0P6H9 643 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 GRIK4Q16099 956 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 TMEM266Q2M3C6 531 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 XRRA1Q6P2D8 792 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 METTL7BQ6UX53 244 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 TMC5Q6UXY8 1006 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 RSPH3Q86UC2 560 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 ACSF2Q96CM8 615 aaPredicted RBP7.99□□□□□ -1.13
MUC1-227ENST00000615517 PUF60Q9UHX1 559 aaKnown RBP7.99□□□□□ -1.13
MUC1-227ENST00000615517 TUBE1Q9UJT0 475 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 ANAPC4Q9UJX5 808 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 ZNF215Q9UL58 517 aaPredicted RBP7.99□□□□□ -1.13
MUC1-227ENST00000615517 MRPL11Q9Y3B7 192 aaKnown RBP7.99□□□□□ -1.13
MUC1-227ENST00000615517 SIT1Q9Y3P8 196 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 PCDHB7Q9Y5E2 793 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 SQORQ9Y6N5 450 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 ASH1LQ9NR48 2969 aaKnown RBP7.99□□□□□ -1.13
MUC1-227ENST00000615517 AKAP13Q12802 2813 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 IGSF9BQ9UPX0 1349 aa7.99□□□□□ -1.13
MUC1-227ENST00000615517 SMG1Q96Q15 3661 aaKnown RBP7.99□□□□□ -1.13
MUC1-227ENST00000615517 HELZ2Q9BYK8 2649 aaKnown RBP7.99□□□□□ -1.13
MUC1-227ENST00000615517 SPAG17Q6Q759 2223 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 GREB1Q4ZG55 1949 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 WDR81Q562E7 1941 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 C9IYK1 514 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 SLC30A4O14863 429 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 SPTLC1O15269 473 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 LILRB5O75023 590 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 ZFYP08048 801 aaPredicted RBP7.98□□□□□ -1.13
MUC1-227ENST00000615517 PMLP29590 882 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 HOXA13P31271 388 aaPredicted RBP7.98□□□□□ -1.13
MUC1-227ENST00000615517 MRPS9P82933 396 aaKnown RBP7.98□□□□□ -1.13
MUC1-227ENST00000615517 SP4Q02446 784 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 DMWDQ09019 674 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 PPFIA1Q13136 1202 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 PAK2Q13177 524 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 SMC1AQ14683 1233 aaKnown RBP7.98□□□□□ -1.13
MUC1-227ENST00000615517 ZNF528Q3MIS6 628 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 RRP12Q5JTH9 1297 aaKnown RBP7.98□□□□□ -1.13
MUC1-227ENST00000615517 GPATCH4Q5T3I0 446 aaKnown RBP7.98□□□□□ -1.13
MUC1-227ENST00000615517 TSHZ3Q63HK5 1081 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 PHLDB3Q6NSJ2 640 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 KCNT2Q6UVM3 1135 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 OTOP3Q7RTS5 596 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 FTSJ3Q8IY81 847 aaKnown RBP7.98□□□□□ -1.13
MUC1-227ENST00000615517 SLC44A3Q8N4M1 653 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 GPR152Q8TDT2 470 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 SLC22A17Q8WUG5 538 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 FOXQ1Q9C009 403 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 FAM49AQ9H0Q0 323 aaPredicted RBP7.98□□□□□ -1.13
MUC1-227ENST00000615517 EPC1Q9H2F5 836 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 RNF19AQ9NV58 838 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 IGSF9Q9P2J2 1179 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 ANGPTL2Q9UKU9 493 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 USP18Q9UMW8 372 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 SMG5Q9UPR3 1016 aaKnown RBP7.98□□□□□ -1.13
MUC1-227ENST00000615517 TRPV2Q9Y5S1 764 aa7.98□□□□□ -1.13
MUC1-227ENST00000615517 NAV2Q8IVL1 2488 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 SPATA31C2B4DYI2 1134 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 PPP1R11O60927 126 aaPredicted RBP7.97□□□□□ -1.13
MUC1-227ENST00000615517 RFX1P22670 979 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 MARK3P27448 753 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 CCND2P30279 289 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 FXR2P51116 673 aaKnown RBP eCLIP7.97□□□□□ -1.13
MUC1-227ENST00000615517 NEDD9Q14511 834 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 ZMYM1Q5SVZ6 1142 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 VPS53Q5VIR6 699 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 IER5Q5VY09 327 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 CCDC149Q6ZUS6 474 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 GPR149Q86SP6 731 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 ZBTB44Q8NCP5 570 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 PJA1Q8NG27 643 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 AUTS2Q8WXX7 1259 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 NELL1Q92832 810 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 CASD1Q96PB1 797 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 ADAM2Q99965 735 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 CELF4Q9BZC1 486 aaKnown RBP7.97□□□□□ -1.13
MUC1-227ENST00000615517 JMJD4Q9H9V9 463 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 VAT1LQ9HCJ6 419 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 RGS18Q9NS28 235 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 ECHDC1Q9NTX5 307 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 DZANK1Q9NVP4 752 aa7.97□□□□□ -1.13
MUC1-227ENST00000615517 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.97□□□□□ -1.13
MUC1-227ENST00000615517 MYH9P35579 1960 aaKnown RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms