RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 CHRNA5P30532 468 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 POLR2BP30876 1174 aaKnown RBP9.44□□□□□ -0.9
PDE6A-204ENST00000613228 PAF1Q8N7H5 531 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 BBOF1Q8ND07 529 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 ENGASEQ8NFI3 743 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 PBKQ96KB5 322 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 TSNARE1Q96NA8 513 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 NLRC4Q9NPP4 1024 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 HIP1RO75146 1068 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 CHRM1P11229 460 aaPredicted RBP9.44□□□□□ -0.9
PDE6A-204ENST00000613228 PSMC5P62195 406 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 SETDB1Q15047 1291 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 POMGNT1Q8WZA1 660 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 ANKRD36BP1Q96IX9 119 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 FAM169AQ9Y6X4 670 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 GAKO14976 1311 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 LAMB4A4D0S4 1761 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 IQCA1LA6NCM1 817 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 THAP12O43422 761 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 AP3M2P53677 418 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 E2F5Q15329 346 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 FKBP1CQ5VVH2 108 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 NAIF1Q69YI7 327 aaPredicted RBP9.44□□□□□ -0.9
PDE6A-204ENST00000613228 FRMD5Q7Z6J6 570 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 FAM114A2Q9NRY5 505 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 TMEM260Q9NX78 707 aa9.44□□□□□ -0.9
PDE6A-204ENST00000613228 PIK3CAP42336 1068 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 LRMPQ12912 555 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 IFT122Q9HBG6 1241 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 PAIP2BQ9ULR5 123 aaKnown RBP9.43□□□□□ -0.9
PDE6A-204ENST00000613228 PITPNM2Q9BZ72 1349 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 E7EVH7 732 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 TULP2O00295 520 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 PSMD14O00487 310 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 NPM3O75607 178 aaKnown RBP9.43□□□□□ -0.9
PDE6A-204ENST00000613228 STK10O94804 968 aaKnown RBP9.43□□□□□ -0.9
PDE6A-204ENST00000613228 PRR29P0C7W0 189 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 PTK2Q05397 1052 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 KNOP1Q1ED39 458 aaKnown RBP9.43□□□□□ -0.9
PDE6A-204ENST00000613228 CCDC14Q49A88 953 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 RUFY4Q6ZNE9 571 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 SRGAP1Q7Z6B7 1085 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 WRNIP1Q96S55 665 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 YIPF3Q9GZM5 350 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 ZNF408Q9H9D4 720 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 NHEJ1Q9H9Q4 299 aaPredicted RBP9.43□□□□□ -0.9
PDE6A-204ENST00000613228 JMJD4Q9H9V9 463 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 RNF40O75150 1001 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 HOXA13P31271 388 aaPredicted RBP9.43□□□□□ -0.9
PDE6A-204ENST00000613228 TNFAIP2Q03169 654 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 PTPAQ15257 358 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 RSPH3Q86UC2 560 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 APLFQ8IW19 511 aaPredicted RBP9.43□□□□□ -0.9
PDE6A-204ENST00000613228 C2orf40Q9H1Z8 148 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 GJB4Q9NTQ9 266 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 SLIT2O94813 1529 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 PDXKO00764 312 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 NDUFB10O96000 172 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 HARSP12081 509 aaKnown RBP9.43□□□□□ -0.9
PDE6A-204ENST00000613228 KLRK1P26718 216 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 PRCPP42785 496 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 QARSP47897 775 aaKnown RBP9.43□□□□□ -0.9
PDE6A-204ENST00000613228 CACNB3P54284 484 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 ACBD5Q5T8D3 534 aaPredicted RBP9.43□□□□□ -0.9
PDE6A-204ENST00000613228 EP400NLQ6ZTU2 488 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 LDHDQ86WU2 507 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 RUBCNQ92622 972 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 HVCN1Q96D96 273 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 POLR3CQ9BUI4 534 aaPredicted RBP9.43□□□□□ -0.9
PDE6A-204ENST00000613228 RNF146Q9NTX7 359 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 AGTPBP1Q9UPW5 1226 aa9.43□□□□□ -0.9
PDE6A-204ENST00000613228 HNRNPDLO14979 420 aaKnown RBP9.42□□□□□ -0.9
PDE6A-204ENST00000613228 EIF3DO15371 548 aaKnown RBP eCLIP9.42□□□□□ -0.9
PDE6A-204ENST00000613228 PPFIA2O75334 1257 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 TM4SF1P30408 202 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 IQCB1Q15051 598 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 SMYD4Q8IYR2 804 aaPredicted RBP9.42□□□□□ -0.9
PDE6A-204ENST00000613228 STMN2Q93045 179 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 RMDN3Q96TC7 470 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 RIT2Q99578 217 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 IDI2Q9BXS1 227 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 MYOZ2Q9NPC6 264 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 HAUS2Q9NVX0 235 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 NOP53Q9NZM5 478 aaKnown RBP9.42□□□□□ -0.9
PDE6A-204ENST00000613228 TAF6LQ9Y6J9 622 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 PFASO15067 1338 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 MED7O43513 233 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 NDUFA10O95299 355 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 NTRK3Q16288 839 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 ARHGAP44Q17R89 818 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 MUM1Q2TAK8 710 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 FAM83AQ86UY5 434 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 NRBP1Q9UHY1 535 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 SATB2Q9UPW6 733 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 HPSEQ9Y251 543 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 ANO9A1A5B4 782 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 TMEM191BP0C7N4 346 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 HADHQ16836 314 aaKnown RBP9.42□□□□□ -0.9
PDE6A-204ENST00000613228 TRIM68Q6AZZ1 485 aa9.42□□□□□ -0.9
PDE6A-204ENST00000613228 SLC10A4Q96EP9 437 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms