RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 TTC38Q5R3I4 469 aa19.82■□□□□ 0.76
USHBP1-209ENST00000598570 LARP1BQ659C4 914 aaKnown RBP19.82■□□□□ 0.76
USHBP1-209ENST00000598570 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.82■□□□□ 0.76
USHBP1-209ENST00000598570 DKC1O60832 514 aaKnown RBP eCLIP19.81■□□□□ 0.76
USHBP1-209ENST00000598570 IGBP1P78318 339 aa19.81■□□□□ 0.76
USHBP1-209ENST00000598570 PDIA5Q14554 519 aa19.81■□□□□ 0.76
USHBP1-209ENST00000598570 FBXO47Q5MNV8 452 aa19.81■□□□□ 0.76
USHBP1-209ENST00000598570 IER5Q5VY09 327 aa19.81■□□□□ 0.76
USHBP1-209ENST00000598570 USP38Q8NB14 1042 aa19.81■□□□□ 0.76
USHBP1-209ENST00000598570 NEK9Q8TD19 979 aa19.81■□□□□ 0.76
USHBP1-209ENST00000598570 CELF4Q9BZC1 486 aaKnown RBP19.81■□□□□ 0.76
USHBP1-209ENST00000598570 PTPRSQ13332 1948 aa19.8■□□□□ 0.76
USHBP1-209ENST00000598570 LAD1O00515 517 aa19.8■□□□□ 0.76
USHBP1-209ENST00000598570 XRCC6P12956 609 aaKnown RBP eCLIP19.8■□□□□ 0.76
USHBP1-209ENST00000598570 MCM7P33993 719 aa19.8■□□□□ 0.76
USHBP1-209ENST00000598570 PRPHP41219 470 aa19.8■□□□□ 0.76
USHBP1-209ENST00000598570 FXR2P51116 673 aaKnown RBP eCLIP19.8■□□□□ 0.76
USHBP1-209ENST00000598570 LPIN1Q14693 890 aa19.8■□□□□ 0.76
USHBP1-209ENST00000598570 ZNF174Q15697 407 aa19.8■□□□□ 0.76
USHBP1-209ENST00000598570 RILPL1Q5EBL4 403 aa19.8■□□□□ 0.76
USHBP1-209ENST00000598570 CKAP2LQ8IYA6 745 aa19.8■□□□□ 0.76
USHBP1-209ENST00000598570 DBF4BQ8NFT6 615 aa19.8■□□□□ 0.76
USHBP1-209ENST00000598570 APBB2Q92870 758 aa19.8■□□□□ 0.76
USHBP1-209ENST00000598570 ZSWIM4Q9H7M6 989 aa19.8■□□□□ 0.76
USHBP1-209ENST00000598570 NOL7Q9UMY1 257 aaKnown RBP19.8■□□□□ 0.76
USHBP1-209ENST00000598570 SLC4A7Q9Y6M7 1214 aa19.8■□□□□ 0.76
USHBP1-209ENST00000598570 MICAL3Q7RTP6 2002 aa19.8■□□□□ 0.76
USHBP1-209ENST00000598570 CHD7Q9P2D1 2997 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 GPR32O75388 356 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 MAFO75444 373 aaPredicted RBP19.79■□□□□ 0.76
USHBP1-209ENST00000598570 SLC34A2O95436 690 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 OR52Z1P0C646 297 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 SPATA31C1P0DKV0 1188 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 PDCP20941 246 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 TXKP42681 527 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 IKBKEQ14164 716 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 CRIPAKQ8N1N5 446 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 BANK1Q8NDB2 785 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 SLC9A7Q96T83 725 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 EIF2AK1Q9BQI3 630 aaKnown RBP19.79■□□□□ 0.76
USHBP1-209ENST00000598570 POLR3CQ9BUI4 534 aaPredicted RBP19.79■□□□□ 0.76
USHBP1-209ENST00000598570 FTOQ9C0B1 505 aaKnown RBP eCLIP19.79■□□□□ 0.76
USHBP1-209ENST00000598570 ADAMTS10Q9H324 1103 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 RGL1Q9NZL6 768 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 PCDHB6Q9Y5E3 794 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 CDY2AQ9Y6F7 541 aa19.79■□□□□ 0.76
USHBP1-209ENST00000598570 LOXHD1Q8IVV2 1947 aa19.78■□□□□ 0.76
USHBP1-209ENST00000598570 TRANK1O15050 2925 aa19.78■□□□□ 0.76
USHBP1-209ENST00000598570 MUTP22033 750 aa19.78■□□□□ 0.76
USHBP1-209ENST00000598570 WDR5P61964 334 aaKnown RBP19.78■□□□□ 0.76
USHBP1-209ENST00000598570 TSHZ1Q6ZSZ6 1077 aa19.78■□□□□ 0.76
USHBP1-209ENST00000598570 IGSF22Q8N9C0 903 aa19.78■□□□□ 0.76
USHBP1-209ENST00000598570 SEPT8Q92599 483 aa19.78■□□□□ 0.76
USHBP1-209ENST00000598570 DHX33Q9H6R0 707 aaKnown RBP19.78■□□□□ 0.76
USHBP1-209ENST00000598570 AGO3Q9H9G7 860 aaKnown RBP19.78■□□□□ 0.76
USHBP1-209ENST00000598570 PCDHA11Q9Y5I1 949 aa19.78■□□□□ 0.76
USHBP1-209ENST00000598570 TRPV2Q9Y5S1 764 aa19.78■□□□□ 0.76
USHBP1-209ENST00000598570 MARCH6O60337 910 aa19.77■□□□□ 0.76
USHBP1-209ENST00000598570 ATP2A2P16615 1042 aaKnown RBP19.77■□□□□ 0.76
USHBP1-209ENST00000598570 CRYBB1P53674 252 aaPredicted RBP19.77■□□□□ 0.76
USHBP1-209ENST00000598570 PTGDRQ13258 359 aa19.77■□□□□ 0.76
USHBP1-209ENST00000598570 EFCAB12Q6NXP0 572 aa19.77■□□□□ 0.76
USHBP1-209ENST00000598570 BRAPQ7Z569 592 aa19.77■□□□□ 0.76
USHBP1-209ENST00000598570 DYDC2Q96IM9 177 aa19.77■□□□□ 0.76
USHBP1-209ENST00000598570 LXNQ9BS40 222 aa19.77■□□□□ 0.76
USHBP1-209ENST00000598570 PBX4Q9BYU1 374 aa19.77■□□□□ 0.76
USHBP1-209ENST00000598570 CDHR5Q9HBB8 845 aa19.77■□□□□ 0.76
USHBP1-209ENST00000598570 TUFT1Q9NNX1 390 aa19.77■□□□□ 0.76
USHBP1-209ENST00000598570 CYP26B1Q9NR63 512 aa19.77■□□□□ 0.76
USHBP1-209ENST00000598570 ANKEF1Q9NU02 776 aa19.77■□□□□ 0.76
USHBP1-209ENST00000598570 TTC3P53804 2025 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 GBF1Q92538 1859 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 DDX11L8A8MPP1 907 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 GRXCR1A8MXD5 290 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 H3BQV1 296 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 CTSHP09668 335 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 ATP2B1P20020 1258 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 SYT1P21579 422 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 RPA1P27694 616 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 CDC42EP1Q00587 391 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 GNL2Q13823 731 aaKnown RBP19.76■□□□□ 0.75
USHBP1-209ENST00000598570 NBR1Q14596 966 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 IL17AQ16552 155 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 NCAPH2Q6IBW4 605 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 HERC6Q8IVU3 1022 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 EXOC8Q8IYI6 725 aa19.76■□□□□ 0.75
USHBP1-209ENST00000598570 ZNF579Q8NAF0 562 aaKnown RBP19.76■□□□□ 0.75
USHBP1-209ENST00000598570 FAM49AQ9H0Q0 323 aaPredicted RBP19.76■□□□□ 0.75
USHBP1-209ENST00000598570 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.75■□□□□ 0.75
USHBP1-209ENST00000598570 TMEM150BA6NC51 233 aa19.75■□□□□ 0.75
USHBP1-209ENST00000598570 DNAJB2P25686 324 aa19.75■□□□□ 0.75
USHBP1-209ENST00000598570 TMOD1P28289 359 aa19.75■□□□□ 0.75
USHBP1-209ENST00000598570 YWHABP31946 246 aaKnown RBP19.75■□□□□ 0.75
USHBP1-209ENST00000598570 ATP2C1P98194 919 aaPredicted RBP19.75■□□□□ 0.75
USHBP1-209ENST00000598570 RAB30Q15771 203 aa19.75■□□□□ 0.75
USHBP1-209ENST00000598570 OTUD6AQ7L8S5 288 aa19.75■□□□□ 0.75
USHBP1-209ENST00000598570 CATSPER3Q86XQ3 398 aa19.75■□□□□ 0.75
USHBP1-209ENST00000598570 IFIH1Q9BYX4 1025 aaKnown RBP19.75■□□□□ 0.75
USHBP1-209ENST00000598570 TTYH1Q9H313 450 aaPredicted RBP19.75■□□□□ 0.75
USHBP1-209ENST00000598570 SEMA6BQ9H3T3 888 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms