RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 FBXO47Q5MNV8 452 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 TAF2Q6P1X5 1199 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 RUFY4Q6ZNE9 571 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 TSHZ1Q6ZSZ6 1077 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 TRIM50Q86XT4 487 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 NPAS4Q8IUM7 802 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 KIAA2013Q8IYS2 634 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 IL31RAQ8NI17 732 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 KCNG4Q8TDN1 519 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 BRF1Q92994 677 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 AGO3Q9H9G7 860 aaKnown RBP14.62□□□□□ -0.07
SCAF1-202ENST00000595242 ZNF215Q9UL58 517 aaPredicted RBP14.62□□□□□ -0.07
SCAF1-202ENST00000595242 PCDHB12Q9Y5F1 795 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 CFAP47Q6ZTR5 3102 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 NRCAMQ92823 1304 aa14.62□□□□□ -0.07
SCAF1-202ENST00000595242 OTOGLQ3ZCN5 2332 aa14.61□□□□□ -0.07
SCAF1-202ENST00000595242 ZFHX4Q86UP3 3567 aa14.61□□□□□ -0.07
SCAF1-202ENST00000595242 C2CD4DB7Z1M9 353 aa14.61□□□□□ -0.07
SCAF1-202ENST00000595242 OPLAHO14841 1288 aa14.61□□□□□ -0.07
SCAF1-202ENST00000595242 DHX16O60231 1041 aaKnown RBP14.61□□□□□ -0.07
SCAF1-202ENST00000595242 STAG3L1P0CL83 205 aa14.61□□□□□ -0.07
SCAF1-202ENST00000595242 MCM5P33992 734 aa14.61□□□□□ -0.07
SCAF1-202ENST00000595242 GATMP50440 423 aa14.61□□□□□ -0.07
SCAF1-202ENST00000595242 RSPH3Q86UC2 560 aa14.61□□□□□ -0.07
SCAF1-202ENST00000595242 GPR20Q99678 358 aa14.61□□□□□ -0.07
SCAF1-202ENST00000595242 VAT1LQ9HCJ6 419 aa14.61□□□□□ -0.07
SCAF1-202ENST00000595242 CDH22Q9UJ99 828 aa14.61□□□□□ -0.07
SCAF1-202ENST00000595242 ATP6V1DQ9Y5K8 247 aa14.61□□□□□ -0.07
SCAF1-202ENST00000595242 MAP1BP46821 2468 aaKnown RBP14.61□□□□□ -0.07
SCAF1-202ENST00000595242 HOXB8P17481 243 aaPredicted RBP14.6□□□□□ -0.07
SCAF1-202ENST00000595242 CCND2P30279 289 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 HOXA13P31271 388 aaPredicted RBP14.6□□□□□ -0.07
SCAF1-202ENST00000595242 CD52P31358 61 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 ANTXR2P58335 489 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 GHRHRQ02643 423 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 ANGPT1Q15389 498 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 SPOUT1Q5T280 376 aaKnown RBP14.6□□□□□ -0.07
SCAF1-202ENST00000595242 UTP14CQ5TAP6 766 aaKnown RBP14.6□□□□□ -0.07
SCAF1-202ENST00000595242 PDE12Q6L8Q7 609 aaKnown RBP14.6□□□□□ -0.07
SCAF1-202ENST00000595242 LLGL2Q6P1M3 1020 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 METTL7BQ6UX53 244 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 CYFIP1Q7L576 1253 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 TBC1D10CQ8IV04 446 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 FLCNQ8NFG4 579 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 DNAJB3Q8WWF6 145 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 ZKSCAN3Q9BRR0 538 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 FTHL17Q9BXU8 183 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 MAP3K20Q9NYL2 800 aaKnown RBP14.6□□□□□ -0.07
SCAF1-202ENST00000595242 CDY2AQ9Y6F7 541 aa14.6□□□□□ -0.07
SCAF1-202ENST00000595242 FSCN2O14926 492 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 PRC1O43663 620 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 FGF18O76093 207 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 MBD3O95983 291 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 LMNAP02545 664 aaKnown RBP14.59□□□□□ -0.07
SCAF1-202ENST00000595242 ASGR2P07307 311 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 HAND2P61296 217 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 HMGN5P82970 282 aaKnown RBP14.59□□□□□ -0.07
SCAF1-202ENST00000595242 SCRN1Q12765 414 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 NEDD9Q14511 834 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 CWF19L1Q69YN2 538 aaKnown RBP14.59□□□□□ -0.07
SCAF1-202ENST00000595242 RALYLQ86SE5 291 aaKnown RBP14.59□□□□□ -0.07
SCAF1-202ENST00000595242 CCDC105Q8IYK2 499 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 RASGRP4Q8TDF6 673 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 MTA3Q9BTC8 594 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 AMNQ9BXJ7 453 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 POMKQ9H5K3 350 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 JMJD4Q9H9V9 463 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 AAASQ9NRG9 546 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 TMEM260Q9NX78 707 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 TELO2Q9Y4R8 837 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 EVPLQ92817 2033 aa14.59□□□□□ -0.07
SCAF1-202ENST00000595242 PI15O43692 258 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 SCG2P13521 617 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 AOC1P19801 751 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 PDIA3P30101 505 aaKnown RBP14.58□□□□□ -0.08
SCAF1-202ENST00000595242 APOBRQ0VD83 1088 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 PLPP4Q5VZY2 271 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 CES5AQ6NT32 575 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 MFSD6Q6ZSS7 791 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 DGKHQ86XP1 1220 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 THNSL1Q8IYQ7 743 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 PNMA1Q8ND90 353 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 NSUN7Q8NE18 718 aaKnown RBP14.58□□□□□ -0.08
SCAF1-202ENST00000595242 NECTIN4Q96NY8 510 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 SEMA4AQ9H3S1 761 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 LIMD1Q9UGP4 676 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 TUBE1Q9UJT0 475 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 LRFN2Q9ULH4 789 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 DENND4AQ7Z401 1863 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 NID2Q14112 1375 aa14.58□□□□□ -0.08
SCAF1-202ENST00000595242 ARP10275 920 aa14.57□□□□□ -0.08
SCAF1-202ENST00000595242 IBSPP21815 317 aaPredicted RBP14.57□□□□□ -0.08
SCAF1-202ENST00000595242 MRPS6P82932 125 aaKnown RBP14.57□□□□□ -0.08
SCAF1-202ENST00000595242 FGD1P98174 961 aa14.57□□□□□ -0.08
SCAF1-202ENST00000595242 TRDNQ13061 729 aa14.57□□□□□ -0.08
SCAF1-202ENST00000595242 PPFIA1Q13136 1202 aa14.57□□□□□ -0.08
SCAF1-202ENST00000595242 GNPTABQ3T906 1256 aa14.57□□□□□ -0.08
SCAF1-202ENST00000595242 ASPRV1Q53RT3 343 aa14.57□□□□□ -0.08
SCAF1-202ENST00000595242 LARP1BQ659C4 914 aaKnown RBP14.57□□□□□ -0.08
SCAF1-202ENST00000595242 DTWD2Q8NBA8 298 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms