RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 TMEM192Q8IY95 271 aa26.53■■□□□ 1.84
LSM4-204ENST00000594828 FIBCD1Q8N539 461 aa26.53■■□□□ 1.84
LSM4-204ENST00000594828 FAM167AQ96KS9 214 aa26.53■■□□□ 1.84
LSM4-204ENST00000594828 COG5Q9UP83 839 aa26.53■■□□□ 1.84
LSM4-204ENST00000594828 CEP131Q9UPN4 1083 aa26.53■■□□□ 1.84
LSM4-204ENST00000594828 GINS2Q9Y248 185 aa26.53■■□□□ 1.84
LSM4-204ENST00000594828 CHMP2AO43633 222 aa26.52■■□□□ 1.84
LSM4-204ENST00000594828 TDP2O95551 362 aa26.52■■□□□ 1.84
LSM4-204ENST00000594828 C22orf31O95567 290 aa26.52■■□□□ 1.84
LSM4-204ENST00000594828 XBP1P17861 261 aa26.52■■□□□ 1.84
LSM4-204ENST00000594828 SFNP31947 248 aa26.52■■□□□ 1.84
LSM4-204ENST00000594828 AK2P54819 239 aa26.52■■□□□ 1.84
LSM4-204ENST00000594828 NONOQ15233 471 aaKnown RBP eCLIP26.52■■□□□ 1.84
LSM4-204ENST00000594828 METTL13Q8N6R0 699 aa26.52■■□□□ 1.84
LSM4-204ENST00000594828 GJA10Q969M2 543 aa26.52■■□□□ 1.84
LSM4-204ENST00000594828 STK36Q9NRP7 1315 aa26.51■■□□□ 1.83
LSM4-204ENST00000594828 JAK3P52333 1124 aa26.51■■□□□ 1.83
LSM4-204ENST00000594828 KRT25Q7Z3Z0 450 aa26.51■■□□□ 1.83
LSM4-204ENST00000594828 LINC01599Q8WXQ3 324 aa26.51■■□□□ 1.83
LSM4-204ENST00000594828 PHF20Q9BVI0 1012 aa26.51■■□□□ 1.83
LSM4-204ENST00000594828 UNC45AQ9H3U1 944 aa26.51■■□□□ 1.83
LSM4-204ENST00000594828 CDHR5Q9HBB8 845 aa26.51■■□□□ 1.83
LSM4-204ENST00000594828 NRBP2Q9NSY0 501 aa26.51■■□□□ 1.83
LSM4-204ENST00000594828 MYH9P35579 1960 aaKnown RBP26.5■■□□□ 1.83
LSM4-204ENST00000594828 H3BNC9 293 aa26.5■■□□□ 1.83
LSM4-204ENST00000594828 MAGEB2O15479 319 aa26.5■■□□□ 1.83
LSM4-204ENST00000594828 PSMD10O75832 226 aa26.5■■□□□ 1.83
LSM4-204ENST00000594828 NFX1Q12986 1120 aaKnown RBP26.5■■□□□ 1.83
LSM4-204ENST00000594828 GPM6BQ13491 265 aa26.5■■□□□ 1.83
LSM4-204ENST00000594828 INF2Q27J81 1249 aa26.5■■□□□ 1.83
LSM4-204ENST00000594828 TMEM266Q2M3C6 531 aa26.5■■□□□ 1.83
LSM4-204ENST00000594828 MOXD1Q6UVY6 613 aa26.5■■□□□ 1.83
LSM4-204ENST00000594828 HLA-CQ95604 372 aa26.5■■□□□ 1.83
LSM4-204ENST00000594828 MBOAT7Q96N66 472 aa26.5■■□□□ 1.83
LSM4-204ENST00000594828 COL4A6Q14031 1691 aa26.5■■□□□ 1.83
LSM4-204ENST00000594828 ZNF862O60290 1169 aa26.49■■□□□ 1.83
LSM4-204ENST00000594828 RPS6KA5O75582 802 aa26.49■■□□□ 1.83
LSM4-204ENST00000594828 DGKIO75912 1065 aa26.49■■□□□ 1.83
LSM4-204ENST00000594828 PTPROQ16827 1216 aa26.49■■□□□ 1.83
LSM4-204ENST00000594828 ADAMTS19Q8TE59 1207 aa26.49■■□□□ 1.83
LSM4-204ENST00000594828 ZNF689Q96CS4 500 aaPredicted RBP26.49■■□□□ 1.83
LSM4-204ENST00000594828 RC3H2Q9HBD1 1191 aaKnown RBP26.49■■□□□ 1.83
LSM4-204ENST00000594828 NOC2LQ9Y3T9 749 aaKnown RBP26.49■■□□□ 1.83
LSM4-204ENST00000594828 ADGRA3Q8IWK6 1321 aa26.48■■□□□ 1.83
LSM4-204ENST00000594828 CCDC194A0A1B0GVG4 234 aa26.48■■□□□ 1.83
LSM4-204ENST00000594828 DTNBO60941 627 aa26.48■■□□□ 1.83
LSM4-204ENST00000594828 CTDNEP1O95476 244 aa26.48■■□□□ 1.83
LSM4-204ENST00000594828 OATP04181 439 aa26.48■■□□□ 1.83
LSM4-204ENST00000594828 BTG3Q14201 252 aaPredicted RBP26.48■■□□□ 1.83
LSM4-204ENST00000594828 ODR4Q5SWX8 454 aa26.48■■□□□ 1.83
LSM4-204ENST00000594828 FAM43BQ6ZT52 329 aaPredicted RBP26.48■■□□□ 1.83
LSM4-204ENST00000594828 MIER3Q7Z3K6 550 aa26.48■■□□□ 1.83
LSM4-204ENST00000594828 RDM1Q8NG50 284 aa26.48■■□□□ 1.83
LSM4-204ENST00000594828 MRPL38Q96DV4 380 aaKnown RBP26.48■■□□□ 1.83
LSM4-204ENST00000594828 TMX1Q9H3N1 280 aa26.48■■□□□ 1.83
LSM4-204ENST00000594828 ORC3Q9UBD5 711 aaPredicted RBP26.48■■□□□ 1.83
LSM4-204ENST00000594828 DDX25Q9UHL0 483 aaKnown RBP26.48■■□□□ 1.83
LSM4-204ENST00000594828 VCANP13611 3396 aa26.48■■□□□ 1.83
LSM4-204ENST00000594828 VTNP04004 478 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 STAG3L1P0CL83 205 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 BMP1P13497 986 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 CRYBB1P53674 252 aaPredicted RBP26.47■■□□□ 1.83
LSM4-204ENST00000594828 PRKCEQ02156 737 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 KIZQ2M2Z5 673 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 LETM2Q2VYF4 491 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 EFCAB12Q6NXP0 572 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 NPAS4Q8IUM7 802 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 CRIPAKQ8N1N5 446 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 TMEM40Q8WWA1 233 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 WASF1Q92558 559 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 PPP1R16BQ96T49 567 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 ERVK-5Q9HDB9 667 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 GJB4Q9NTQ9 266 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 RWDD3Q9Y3V2 267 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 TTC3P53804 2025 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 LOXHD1Q8IVV2 1947 aa26.47■■□□□ 1.83
LSM4-204ENST00000594828 CUL9Q8IWT3 2517 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 REV3LO60673 3130 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 GPR182O15218 404 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 RB1P06400 928 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 TMOD1P28289 359 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 CTNNB1P35222 781 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 BMPR1AP36894 532 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 KCNQ1P51787 676 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 UGCGQ16739 394 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 ME3Q16798 604 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 NECAB1Q8N987 351 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 ETNPPLQ8TBG4 499 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 OSMRQ99650 979 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 ST3GAL5Q9UNP4 418 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 EVPLQ92817 2033 aa26.46■■□□□ 1.83
LSM4-204ENST00000594828 TNFRSF10AO00220 468 aa26.45■■□□□ 1.82
LSM4-204ENST00000594828 GPR32O75388 356 aa26.45■■□□□ 1.82
LSM4-204ENST00000594828 CLCN3P51790 818 aa26.45■■□□□ 1.82
LSM4-204ENST00000594828 NEK4P51957 841 aa26.45■■□□□ 1.82
LSM4-204ENST00000594828 B3GNT9Q6UX72 402 aa26.45■■□□□ 1.82
LSM4-204ENST00000594828 NEK8Q86SG6 692 aa26.45■■□□□ 1.82
LSM4-204ENST00000594828 CLP1Q92989 425 aaKnown RBP26.45■■□□□ 1.82
LSM4-204ENST00000594828 MAP7D2Q96T17 732 aa26.45■■□□□ 1.82
LSM4-204ENST00000594828 UHRF1Q96T88 793 aaPredicted RBP26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms