RNA–Protein interactions for RNA: ENST00000593891.1

ZNF558-202, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 292 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-202ENST00000593891 PDE4AP27815 886 aa13.82□□□□□ -0.2
ZNF558-202ENST00000593891 ADD2P35612 726 aa13.82□□□□□ -0.2
ZNF558-202ENST00000593891 GIT2Q14161 759 aa13.82□□□□□ -0.2
ZNF558-202ENST00000593891 BTNL9Q6UXG8 535 aa13.82□□□□□ -0.2
ZNF558-202ENST00000593891 PPFIBP1Q86W92 1011 aa13.82□□□□□ -0.2
ZNF558-202ENST00000593891 SLC22A17Q8WUG5 538 aa13.82□□□□□ -0.2
ZNF558-202ENST00000593891 BBC3Q96PG8 261 aaPredicted RBP13.82□□□□□ -0.2
ZNF558-202ENST00000593891 NELL2Q99435 816 aa13.82□□□□□ -0.2
ZNF558-202ENST00000593891 DNAJC2Q99543 621 aaKnown RBP13.82□□□□□ -0.2
ZNF558-202ENST00000593891 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.82□□□□□ -0.2
ZNF558-202ENST00000593891 ZNF215Q9UL58 517 aaPredicted RBP13.82□□□□□ -0.2
ZNF558-202ENST00000593891 PADI3Q9ULW8 664 aa13.82□□□□□ -0.2
ZNF558-202ENST00000593891 STX8Q9UNK0 236 aa13.82□□□□□ -0.2
ZNF558-202ENST00000593891 MTMR7Q9Y216 660 aa13.82□□□□□ -0.2
ZNF558-202ENST00000593891 SUPT16HQ9Y5B9 1047 aaKnown RBP13.82□□□□□ -0.2
ZNF558-202ENST00000593891 MYH7BA7E2Y1 1941 aa13.82□□□□□ -0.2
ZNF558-202ENST00000593891 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.81□□□□□ -0.2
ZNF558-202ENST00000593891 NOP56O00567 594 aaKnown RBP13.81□□□□□ -0.2
ZNF558-202ENST00000593891 RPS9P46781 194 aaKnown RBP13.81□□□□□ -0.2
ZNF558-202ENST00000593891 COL28A1Q2UY09 1125 aa13.81□□□□□ -0.2
ZNF558-202ENST00000593891 IER5Q5VY09 327 aa13.81□□□□□ -0.2
ZNF558-202ENST00000593891 TTBK2Q6IQ55 1244 aa13.81□□□□□ -0.2
ZNF558-202ENST00000593891 RSPO2Q6UXX9 243 aaPredicted RBP13.81□□□□□ -0.2
ZNF558-202ENST00000593891 FAM43BQ6ZT52 329 aaPredicted RBP13.81□□□□□ -0.2
ZNF558-202ENST00000593891 FEZF2Q8TBJ5 459 aa13.81□□□□□ -0.2
ZNF558-202ENST00000593891 DNAJB3Q8WWF6 145 aa13.81□□□□□ -0.2
ZNF558-202ENST00000593891 BBXQ8WY36 941 aaPredicted RBP13.81□□□□□ -0.2
ZNF558-202ENST00000593891 CLDN23Q96B33 292 aa13.81□□□□□ -0.2
ZNF558-202ENST00000593891 NOB1Q9ULX3 412 aaKnown RBP13.81□□□□□ -0.2
ZNF558-202ENST00000593891 CCDC171Q6TFL3 1326 aa13.81□□□□□ -0.2
ZNF558-202ENST00000593891 COL4A3Q01955 1670 aa13.8□□□□□ -0.2
ZNF558-202ENST00000593891 RPLP2P05387 115 aaKnown RBP13.8□□□□□ -0.2
ZNF558-202ENST00000593891 NR3C2P08235 984 aa13.8□□□□□ -0.2
ZNF558-202ENST00000593891 MRPS6P82932 125 aaKnown RBP13.8□□□□□ -0.2
ZNF558-202ENST00000593891 TFAP4Q01664 338 aa13.8□□□□□ -0.2
ZNF558-202ENST00000593891 MLF2Q15773 248 aaPredicted RBP13.8□□□□□ -0.2
ZNF558-202ENST00000593891 SLFNL1Q499Z3 407 aa13.8□□□□□ -0.2
ZNF558-202ENST00000593891 SLC44A4Q53GD3 710 aa13.8□□□□□ -0.2
ZNF558-202ENST00000593891 LARP1BQ659C4 914 aaKnown RBP13.8□□□□□ -0.2
ZNF558-202ENST00000593891 SYTL5Q8TDW5 730 aaPredicted RBP13.8□□□□□ -0.2
ZNF558-202ENST00000593891 DCAF4Q8WV16 495 aa13.8□□□□□ -0.2
ZNF558-202ENST00000593891 BCAS3Q9H6U6 928 aa13.8□□□□□ -0.2
ZNF558-202ENST00000593891 LTB4R2Q9NPC1 389 aa13.8□□□□□ -0.2
ZNF558-202ENST00000593891 WDR19Q8NEZ3 1342 aa13.8□□□□□ -0.2
ZNF558-202ENST00000593891 M0QZ92 97 aa13.79□□□□□ -0.2
ZNF558-202ENST00000593891 TOP3BO95985 862 aaKnown RBP13.79□□□□□ -0.2
ZNF558-202ENST00000593891 TGFB3P10600 412 aa13.79□□□□□ -0.2
ZNF558-202ENST00000593891 EIF2AK2P19525 551 aaKnown RBP13.79□□□□□ -0.2
ZNF558-202ENST00000593891 GPC5P78333 572 aa13.79□□□□□ -0.2
ZNF558-202ENST00000593891 POLA2Q14181 598 aa13.79□□□□□ -0.2
ZNF558-202ENST00000593891 SF3A2Q15428 464 aaKnown RBP13.79□□□□□ -0.2
ZNF558-202ENST00000593891 CCDC6Q16204 474 aa13.79□□□□□ -0.2
ZNF558-202ENST00000593891 GIMAP6Q6P9H5 292 aa13.79□□□□□ -0.2
ZNF558-202ENST00000593891 MYADMQ96S97 322 aa13.79□□□□□ -0.2
ZNF558-202ENST00000593891 ATP6V0A4Q9HBG4 840 aa13.79□□□□□ -0.2
ZNF558-202ENST00000593891 WDR6Q9NNW5 1121 aaKnown RBP13.79□□□□□ -0.2
ZNF558-202ENST00000593891 C1orf112Q9NSG2 853 aa13.79□□□□□ -0.2
ZNF558-202ENST00000593891 BAZ2AQ9UIF9 1905 aaKnown RBP13.79□□□□□ -0.2
ZNF558-202ENST00000593891 PLIN4Q96Q06 1357 aa13.79□□□□□ -0.2
ZNF558-202ENST00000593891 MYO18BQ8IUG5 2567 aa13.78□□□□□ -0.2
ZNF558-202ENST00000593891 MYH4Q9Y623 1939 aa13.78□□□□□ -0.2
ZNF558-202ENST00000593891 UBA1P22314 1058 aaKnown RBP13.78□□□□□ -0.2
ZNF558-202ENST00000593891 CNR2P34972 360 aa13.78□□□□□ -0.2
ZNF558-202ENST00000593891 PBX3P40426 434 aa13.78□□□□□ -0.2
ZNF558-202ENST00000593891 MTAPQ13126 283 aa13.78□□□□□ -0.2
ZNF558-202ENST00000593891 SLC24A5Q71RS6 500 aa13.78□□□□□ -0.2
ZNF558-202ENST00000593891 AACSQ86V21 672 aa13.78□□□□□ -0.2
ZNF558-202ENST00000593891 PROSER1Q86XN7 944 aa13.78□□□□□ -0.2
ZNF558-202ENST00000593891 NEUROG3Q9Y4Z2 214 aa13.78□□□□□ -0.2
ZNF558-202ENST00000593891 DMXL2Q8TDJ6 3036 aa13.78□□□□□ -0.2
ZNF558-202ENST00000593891 DENND3A2RUS2 1198 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 ANHXE9PGG2 379 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 GIPC1O14908 333 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 SEC24BO95487 1268 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 ZNF806P0C7X5 589 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 FGFR1P11362 822 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 LAMP2P13473 410 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 CD72P21854 359 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 NFX1Q12986 1120 aaKnown RBP13.77□□□□□ -0.21
ZNF558-202ENST00000593891 HTR4Q13639 388 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 UBE3CQ15386 1083 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 USH1GQ495M9 461 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 CYP26C1Q6V0L0 522 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 MCF2L2Q86YR7 1114 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 VPS52Q8N1B4 723 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 PIK3R5Q8WYR1 880 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 TMEM117Q9H0C3 514 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.77□□□□□ -0.21
ZNF558-202ENST00000593891 TUBE1Q9UJT0 475 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 IRAK3Q9Y616 596 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 NUMBLQ9Y6R0 609 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 HECTD1Q9ULT8 2610 aa13.77□□□□□ -0.21
ZNF558-202ENST00000593891 CLUHO75153 1309 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 HOXA2O43364 376 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 TDGF1P13385 188 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 PFKPQ01813 784 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 SP2Q02086 613 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 UTP14CQ5TAP6 766 aaKnown RBP13.76□□□□□ -0.21
ZNF558-202ENST00000593891 RNF43Q68DV7 783 aa13.76□□□□□ -0.21
ZNF558-202ENST00000593891 SLC39A11Q8N1S5 342 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms