RNA–Protein interactions for RNA: ENST00000591316.1

CROCCP3-205, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 5

Gene CROCCP3, Length 1,563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-205ENST00000591316 CLEC17AQ6ZS10 378 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 UBE2Q1Q7Z7E8 422 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 FSIP1Q8NA03 581 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 SLC43A3Q8NBI5 491 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 LMBR1Q8WVP7 490 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 BHMT2Q9H2M3 363 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 CYP26B1Q9NR63 512 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 BMP2KQ9NSY1 1161 aaPredicted RBP20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 TRMT13Q9NUP7 481 aaKnown RBP20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 ATP11BQ9Y2G3 1177 aa20.48■□□□□ 0.87
CROCCP3-205ENST00000591316 TREHO43280 583 aa20.47■□□□□ 0.87
CROCCP3-205ENST00000591316 GNAT1P11488 350 aa20.47■□□□□ 0.87
CROCCP3-205ENST00000591316 XRCC6P12956 609 aaKnown RBP eCLIP20.47■□□□□ 0.87
CROCCP3-205ENST00000591316 PTGISQ16647 500 aa20.47■□□□□ 0.87
CROCCP3-205ENST00000591316 TRIM60Q495X7 471 aa20.47■□□□□ 0.87
CROCCP3-205ENST00000591316 TRPV6Q9H1D0 765 aa20.47■□□□□ 0.87
CROCCP3-205ENST00000591316 ANKEF1Q9NU02 776 aa20.47■□□□□ 0.87
CROCCP3-205ENST00000591316 MKI67P46013 3256 aaKnown RBP20.47■□□□□ 0.87
CROCCP3-205ENST00000591316 MYH9P35579 1960 aaKnown RBP20.47■□□□□ 0.87
CROCCP3-205ENST00000591316 RRN3P2A6NIE6 340 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 ZBTB42B2RXF5 422 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 POLR2DO15514 142 aaKnown RBP20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 CAPN15O75808 1086 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 PFKFB1P16118 471 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 KLRC1P26715 233 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 TMEM119Q4V9L6 283 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 MARCH8Q5T0T0 291 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 LRRC15Q8TF66 581 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 DHX58Q96C10 678 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 KCNH3Q9ULD8 1083 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 NOD1Q9Y239 953 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 A0A1W2PQ27 194 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 A0A1W2PQ64 194 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 A0A1W2PQD8 194 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 ARHGEF35A5YM69 484 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 B4GALT4O60513 344 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 STAT6P42226 847 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 RARRES1P49788 294 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 NDUFA8P51970 172 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 RTP1P59025 263 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 PTPN11Q06124 597 aaPredicted RBP20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 TARBP2Q15633 366 aaKnown RBP20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 CCDC73Q6ZRK6 1079 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 MAEAQ7L5Y9 396 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 SESTD1Q86VW0 696 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 METTL13Q8N6R0 699 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 MRPS27Q92552 414 aaKnown RBP20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 GOLPH3LQ9H4A5 285 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 SUGCTQ9HAC7 445 aa20.46■□□□□ 0.87
CROCCP3-205ENST00000591316 SLC26A4O43511 780 aa20.45■□□□□ 0.86
CROCCP3-205ENST00000591316 EYA4O95677 639 aa20.45■□□□□ 0.86
CROCCP3-205ENST00000591316 PLA2G4BP0C869 781 aa20.45■□□□□ 0.86
CROCCP3-205ENST00000591316 TLE2Q04725 743 aa20.45■□□□□ 0.86
CROCCP3-205ENST00000591316 TBC1D8BQ0IIM8 1120 aa20.45■□□□□ 0.86
CROCCP3-205ENST00000591316 MCM6Q14566 821 aa20.45■□□□□ 0.86
CROCCP3-205ENST00000591316 MTHFD1LQ6UB35 978 aa20.45■□□□□ 0.86
CROCCP3-205ENST00000591316 TMEM87AQ8NBN3 555 aa20.45■□□□□ 0.86
CROCCP3-205ENST00000591316 BLOC1S4Q9NUP1 217 aa20.45■□□□□ 0.86
CROCCP3-205ENST00000591316 TUBE1Q9UJT0 475 aa20.45■□□□□ 0.86
CROCCP3-205ENST00000591316 DBR1Q9UK59 544 aaKnown RBP20.45■□□□□ 0.86
CROCCP3-205ENST00000591316 SCN10AQ9Y5Y9 1956 aa20.44■□□□□ 0.86
CROCCP3-205ENST00000591316 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.44■□□□□ 0.86
CROCCP3-205ENST00000591316 DCDC2CA8MYV0 355 aa20.44■□□□□ 0.86
CROCCP3-205ENST00000591316 POLGP54098 1239 aaPredicted RBP20.44■□□□□ 0.86
CROCCP3-205ENST00000591316 EFCAB12Q6NXP0 572 aa20.44■□□□□ 0.86
CROCCP3-205ENST00000591316 RAD54LQ92698 747 aa20.44■□□□□ 0.86
CROCCP3-205ENST00000591316 SEZ6LQ9BYH1 1024 aa20.44■□□□□ 0.86
CROCCP3-205ENST00000591316 POLD4Q9HCU8 107 aa20.44■□□□□ 0.86
CROCCP3-205ENST00000591316 COL1A2P08123 1366 aa20.43■□□□□ 0.86
CROCCP3-205ENST00000591316 MROH7Q68CQ1 1323 aa20.43■□□□□ 0.86
CROCCP3-205ENST00000591316 USO1O60763 962 aaKnown RBP20.43■□□□□ 0.86
CROCCP3-205ENST00000591316 CYP2C9P11712 490 aa20.43■□□□□ 0.86
CROCCP3-205ENST00000591316 SYKP43405 635 aa20.43■□□□□ 0.86
CROCCP3-205ENST00000591316 ADAM17P78536 824 aa20.43■□□□□ 0.86
CROCCP3-205ENST00000591316 NAALADL2Q58DX5 795 aa20.43■□□□□ 0.86
CROCCP3-205ENST00000591316 PADI6Q6TGC4 694 aa20.43■□□□□ 0.86
CROCCP3-205ENST00000591316 FAM126BQ8IXS8 530 aa20.43■□□□□ 0.86
CROCCP3-205ENST00000591316 LRRC71Q8N4P6 559 aa20.43■□□□□ 0.86
CROCCP3-205ENST00000591316 IQUBQ8NA54 791 aa20.43■□□□□ 0.86
CROCCP3-205ENST00000591316 CEP89Q96ST8 783 aa20.43■□□□□ 0.86
CROCCP3-205ENST00000591316 WDR81Q562E7 1941 aa20.43■□□□□ 0.86
CROCCP3-205ENST00000591316 GOLGA6L22H0YM25 854 aa20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 TLR3O15455 904 aaKnown RBP20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 SNX17Q15036 470 aa20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 C1orf53Q5VUE5 145 aa20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 RUFY4Q6ZNE9 571 aa20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 KCTD17Q8N5Z5 321 aa20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 SYT2Q8N9I0 419 aaPredicted RBP20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 SLC7A3Q8WY07 619 aa20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 LARP4BQ92615 738 aaKnown RBP20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 STAMQ92783 540 aa20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 FAM49AQ9H0Q0 323 aaPredicted RBP20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 SERTAD1Q9UHV2 236 aa20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 HPSEQ9Y251 543 aa20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 MAGEB2O15479 319 aa20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 MAFO75444 373 aaPredicted RBP20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 C22orf31O95567 290 aa20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 HOXC8P31273 242 aa20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 SLC12A3P55017 1021 aa20.42■□□□□ 0.86
CROCCP3-205ENST00000591316 UBE2HP62256 183 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms