RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 RAB21Q9UL25 225 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 L1RE1Q9UN81 338 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 TRAF3IP3Q9Y228 551 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 PDXKO00764 312 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 SERPING1P05155 500 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 EPM2AIP1Q7L775 607 aaPredicted RBP14.99□□□□□ -0.01
SRSF1-205ENST00000582730 MSANTD4Q8NCY6 345 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 HINFPQ9BQA5 517 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 LXNQ9BS40 222 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 NUCKS1Q9H1E3 243 aaKnown RBP14.99□□□□□ -0.01
SRSF1-205ENST00000582730 PARVGQ9HBI0 331 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 RAVER2Q9HCJ3 691 aaKnown RBP14.99□□□□□ -0.01
SRSF1-205ENST00000582730 PIM2Q9P1W9 311 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 RGS17Q9UGC6 210 aaPredicted RBP14.99□□□□□ -0.01
SRSF1-205ENST00000582730 ASTN1O14525 1302 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 NCK2O43639 380 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 TBC1D12O60347 775 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 MATR3P43243 847 aaKnown RBP eCLIP14.99□□□□□ -0.01
SRSF1-205ENST00000582730 MARSP56192 900 aaKnown RBP14.99□□□□□ -0.01
SRSF1-205ENST00000582730 PPP2R5CQ13362 524 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 EXOC3L4Q17RC7 722 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 FKBP1CQ5VVH2 108 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 FAM178BQ8IXR5 827 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 PURBQ96QR8 312 aaKnown RBP14.99□□□□□ -0.01
SRSF1-205ENST00000582730 WDR11Q9BZH6 1224 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 WRAP73Q9P2S5 460 aaPredicted RBP14.99□□□□□ -0.01
SRSF1-205ENST00000582730 ADAMTS1Q9UHI8 967 aa14.99□□□□□ -0.01
SRSF1-205ENST00000582730 ANO9A1A5B4 782 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 ARHGEF35A5YM69 484 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 ZMYND10O75800 440 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 TUBB4BP68371 445 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 C2orf54Q08AI8 447 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 ODR4Q5SWX8 454 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 PAXIP1Q6ZW49 1069 aaPredicted RBP14.98□□□□□ -0.01
SRSF1-205ENST00000582730 TAOK3Q9H2K8 898 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 JRKLQ9Y4A0 524 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 SSU72P8A0A1W2PR75 194 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 EIF3JO75822 258 aaKnown RBP14.98□□□□□ -0.01
SRSF1-205ENST00000582730 FLOT1O75955 427 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 GAP43P17677 238 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 NFRKBQ6P4R8 1299 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 FRMD5Q7Z6J6 570 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 IL31RAQ8NI17 732 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 NACC1Q96RE7 527 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 SALL4Q9UJQ4 1053 aa14.98□□□□□ -0.01
SRSF1-205ENST00000582730 CYP2J2P51589 502 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 SETQ01105 290 aaPredicted RBP14.97□□□□□ -0.01
SRSF1-205ENST00000582730 CCDC181Q5TID7 509 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 C1orf186Q6ZWK4 172 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 SH2D3AQ9BRG2 576 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 LUC7LQ9NQ29 371 aaKnown RBP14.97□□□□□ -0.01
SRSF1-205ENST00000582730 COL20A1Q9P218 1284 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 GJA3Q9Y6H8 435 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 PDE2AO00408 941 aaPredicted RBP14.97□□□□□ -0.01
SRSF1-205ENST00000582730 ICAM1P05362 532 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 ITGB5P18084 799 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 COG2Q14746 738 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 MIER3Q7Z3K6 550 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 COG1Q8WTW3 980 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 NOX5Q96PH1 765 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 MXRA8Q9BRK3 442 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 SNX12Q9UMY4 172 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 PHACTR2O75167 634 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 EIF2AK2P19525 551 aaKnown RBP14.97□□□□□ -0.01
SRSF1-205ENST00000582730 SAMD7Q7Z3H4 446 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 SYCP3Q8IZU3 236 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 PRPF38AQ8NAV1 312 aaKnown RBP14.97□□□□□ -0.01
SRSF1-205ENST00000582730 CCDC43Q96MW1 224 aaKnown RBP14.97□□□□□ -0.01
SRSF1-205ENST00000582730 GANQ9H2C0 597 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 OLFML3Q9NRN5 406 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 SMARCAL1Q9NZC9 954 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 GCNT4Q9P109 453 aa14.97□□□□□ -0.01
SRSF1-205ENST00000582730 ASTN2O75129 1339 aaPredicted RBP14.96□□□□□ -0.01
SRSF1-205ENST00000582730 A0A087X0T9 212 aa14.96□□□□□ -0.01
SRSF1-205ENST00000582730 FAM170AA1A519 330 aa14.96□□□□□ -0.01
SRSF1-205ENST00000582730 RPS6KA5O75582 802 aa14.96□□□□□ -0.01
SRSF1-205ENST00000582730 LCA5LO95447 670 aa14.96□□□□□ -0.01
SRSF1-205ENST00000582730 FAM228BP0C875 321 aa14.96□□□□□ -0.01
SRSF1-205ENST00000582730 MYCLP12524 364 aaPredicted RBP14.96□□□□□ -0.01
SRSF1-205ENST00000582730 IRX3P78415 501 aaPredicted RBP14.96□□□□□ -0.01
SRSF1-205ENST00000582730 TNIP1Q15025 636 aa14.96□□□□□ -0.01
SRSF1-205ENST00000582730 ASTE1Q2TB18 679 aaPredicted RBP14.96□□□□□ -0.01
SRSF1-205ENST00000582730 TBC1D10BQ4KMP7 808 aaPredicted RBP14.96□□□□□ -0.01
SRSF1-205ENST00000582730 DALRD3Q5D0E6 543 aaKnown RBP14.96□□□□□ -0.01
SRSF1-205ENST00000582730 HS2ST1Q7LGA3 356 aa14.96□□□□□ -0.01
SRSF1-205ENST00000582730 ZC3H3Q8IXZ2 948 aaKnown RBP14.96□□□□□ -0.01
SRSF1-205ENST00000582730 FAM186BQ8IYM0 893 aa14.96□□□□□ -0.01
SRSF1-205ENST00000582730 GOLGA6L1Q8N7Z2 621 aa14.96□□□□□ -0.01
SRSF1-205ENST00000582730 RDH13Q8NBN7 331 aa14.96□□□□□ -0.01
SRSF1-205ENST00000582730 METTL14Q9HCE5 456 aaKnown RBP14.96□□□□□ -0.01
SRSF1-205ENST00000582730 KCNH7Q9NS40 1196 aa14.96□□□□□ -0.01
SRSF1-205ENST00000582730 TGFB1I1O43294 461 aa14.96□□□□□ -0.02
SRSF1-205ENST00000582730 PPP1R12BO60237 982 aaPredicted RBP14.96□□□□□ -0.02
SRSF1-205ENST00000582730 UCHL3P15374 230 aa14.96□□□□□ -0.02
SRSF1-205ENST00000582730 PTGER2P43116 358 aa14.96□□□□□ -0.02
SRSF1-205ENST00000582730 MRPS25P82663 173 aaKnown RBP14.96□□□□□ -0.02
SRSF1-205ENST00000582730 CASP8Q14790 479 aa14.96□□□□□ -0.02
SRSF1-205ENST00000582730 EPHA7Q15375 998 aa14.96□□□□□ -0.02
SRSF1-205ENST00000582730 KIAA0753Q2KHM9 967 aa14.96□□□□□ -0.02
SRSF1-205ENST00000582730 MSL3Q8N5Y2 521 aaKnown RBP14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms