RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.93□□□□□ -0.185e-7■■□□□ 13.9
RNF40-211ENST00000567365 UBE2OQ9C0C9 1292 aaKnown RBP13.93□□□□□ -0.18
RNF40-211ENST00000567365 NRBP2Q9NSY0 501 aa13.93□□□□□ -0.18
RNF40-211ENST00000567365 CEP131Q9UPN4 1083 aa13.93□□□□□ -0.18
RNF40-211ENST00000567365 MORC2Q9Y6X9 1032 aaPredicted RBP13.93□□□□□ -0.18
RNF40-211ENST00000567365 CHD9Q3L8U1 2897 aa13.93□□□□□ -0.18
RNF40-211ENST00000567365 ZBTB39O15060 712 aa13.92□□□□□ -0.18
RNF40-211ENST00000567365 PARNO95453 639 aaKnown RBP13.92□□□□□ -0.18
RNF40-211ENST00000567365 CHRNA1P02708 482 aa13.92□□□□□ -0.18
RNF40-211ENST00000567365 PDIA4P13667 645 aaKnown RBP13.92□□□□□ -0.18
RNF40-211ENST00000567365 KLRC1P26715 233 aa13.92□□□□□ -0.18
RNF40-211ENST00000567365 THPOP40225 353 aa13.92□□□□□ -0.18
RNF40-211ENST00000567365 TECP42680 631 aa13.92□□□□□ -0.18
RNF40-211ENST00000567365 MKRN4PQ13434 485 aaPredicted RBP13.92□□□□□ -0.18
RNF40-211ENST00000567365 PKP1Q13835 747 aa13.92□□□□□ -0.18
RNF40-211ENST00000567365 PDIA5Q14554 519 aa13.92□□□□□ -0.18
RNF40-211ENST00000567365 PTPAQ15257 358 aa13.92□□□□□ -0.18
RNF40-211ENST00000567365 SHHQ15465 462 aa13.92□□□□□ -0.18
RNF40-211ENST00000567365 ARL6IP4Q66PJ3 421 aaKnown RBP13.92□□□□□ -0.18
RNF40-211ENST00000567365 TDHQ8IZJ6 230 aa13.92□□□□□ -0.18
RNF40-211ENST00000567365 RETREG2Q8NC44 543 aa13.92□□□□□ -0.18
RNF40-211ENST00000567365 DNAJB3Q8WWF6 145 aa13.92□□□□□ -0.18
RNF40-211ENST00000567365 POLR3CQ9BUI4 534 aaPredicted RBP13.92□□□□□ -0.18
RNF40-211ENST00000567365 ZSCAN16Q9H4T2 348 aaPredicted RBP13.92□□□□□ -0.18
RNF40-211ENST00000567365 ZSWIM4Q9H7M6 989 aa13.92□□□□□ -0.18
RNF40-211ENST00000567365 KDM3AQ9Y4C1 1321 aa13.91□□□□□ -0.18
RNF40-211ENST00000567365 RSPH10B2B2RC85 870 aa13.91□□□□□ -0.18
RNF40-211ENST00000567365 DKC1O60832 514 aaKnown RBP eCLIP13.91□□□□□ -0.18
RNF40-211ENST00000567365 MED24O75448 989 aa13.91□□□□□ -0.18
RNF40-211ENST00000567365 RPLP2P05387 115 aaKnown RBP13.91□□□□□ -0.18
RNF40-211ENST00000567365 PFKMP08237 780 aa13.91□□□□□ -0.18
RNF40-211ENST00000567365 RSPH10BP0C881 870 aa13.91□□□□□ -0.18
RNF40-211ENST00000567365 ACRP10323 421 aa13.91□□□□□ -0.18
RNF40-211ENST00000567365 RPA1P27694 616 aa13.91□□□□□ -0.18
RNF40-211ENST00000567365 CYP4A11Q02928 519 aa13.91□□□□□ -0.18
RNF40-211ENST00000567365 CTTNQ14247 550 aaKnown RBP13.91□□□□□ -0.18
RNF40-211ENST00000567365 TCTN1Q2MV58 587 aa13.91□□□□□ -0.18
RNF40-211ENST00000567365 CATSPER3Q86XQ3 398 aa13.91□□□□□ -0.18
RNF40-211ENST00000567365 CKAP2LQ8IYA6 745 aa13.91□□□□□ -0.18
RNF40-211ENST00000567365 ZNF579Q8NAF0 562 aaKnown RBP13.91□□□□□ -0.18
RNF40-211ENST00000567365 MMTAG2Q9BU76 263 aaKnown RBP13.91□□□□□ -0.18
RNF40-211ENST00000567365 FTOQ9C0B1 505 aaKnown RBP eCLIP13.91□□□□□ -0.18
RNF40-211ENST00000567365 TUFT1Q9NNX1 390 aa13.91□□□□□ -0.18
RNF40-211ENST00000567365 SEPT9Q9UHD8 586 aaPredicted RBP13.91□□□□□ -0.18
RNF40-211ENST00000567365 LOXHD1Q8IVV2 1947 aa13.91□□□□□ -0.18
RNF40-211ENST00000567365 COL6A3P12111 3177 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 MAGEB2O15479 319 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 MAFO75444 373 aaPredicted RBP13.9□□□□□ -0.18
RNF40-211ENST00000567365 BMP15O95972 392 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 ZSCAN22P10073 491 aaPredicted RBP13.9□□□□□ -0.18
RNF40-211ENST00000567365 XRCC6P12956 609 aaKnown RBP eCLIP13.9□□□□□ -0.18
RNF40-211ENST00000567365 MUTP22033 750 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 YWHABP31946 246 aaKnown RBP13.9□□□□□ -0.18
RNF40-211ENST00000567365 NPEPPSP55786 919 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 MRPS6P82932 125 aaKnown RBP13.9□□□□□ -0.18
RNF40-211ENST00000567365 SF3A1Q15459 793 aaKnown RBP13.9□□□□□ -0.18
RNF40-211ENST00000567365 ECM1Q16610 540 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 PLEKHG4Q58EX7 1191 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 PLA2G4FQ68DD2 849 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 PSRC1Q6PGN9 363 aaPredicted RBP13.9□□□□□ -0.18
RNF40-211ENST00000567365 DTHD1Q6ZMT9 781 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 ZNF365Q70YC5 407 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 TRMT1LQ7Z2T5 733 aaKnown RBP13.9□□□□□ -0.18
RNF40-211ENST00000567365 RPUSD2Q8IZ73 545 aaKnown RBP13.9□□□□□ -0.18
RNF40-211ENST00000567365 NME8Q8N427 588 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 DEFB123Q8N688 67 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 HERVK_113Q902F9 699 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 SH2D3AQ9BRG2 576 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 DHX33Q9H6R0 707 aaKnown RBP13.9□□□□□ -0.18
RNF40-211ENST00000567365 CYP26B1Q9NR63 512 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 ANKEF1Q9NU02 776 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 ZDHHC9Q9Y397 364 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 PPME1Q9Y570 386 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 CLIC4Q9Y696 253 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 PTPRSQ13332 1948 aa13.9□□□□□ -0.18
RNF40-211ENST00000567365 DDX11L8A8MPP1 907 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 PP2D1A8MPX8 630 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 BRD1O95696 1058 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 HSP90AA1P07900 732 aaKnown RBP13.89□□□□□ -0.19
RNF40-211ENST00000567365 CTSHP09668 335 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 DDIT3P35638 169 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 DRP2Q13474 957 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 LRIT3Q3SXY7 679 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 MTERF2Q49AM1 385 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 TPH2Q8IWU9 490 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 SPRYD3Q8NCJ5 442 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 USP28Q96RU2 1077 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 FAM49AQ9H0Q0 323 aaPredicted RBP13.89□□□□□ -0.19
RNF40-211ENST00000567365 CXXC1Q9P0U4 656 aaPredicted RBP13.89□□□□□ -0.19
RNF40-211ENST00000567365 CHD7Q9P2D1 2997 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 LRWD1Q9UFC0 647 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 CDY2AQ9Y6F7 541 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 SQORQ9Y6N5 450 aa13.89□□□□□ -0.19
RNF40-211ENST00000567365 MICAL3Q7RTP6 2002 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 GPR32O75388 356 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 F13A1P00488 732 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 NASPP49321 788 aaPredicted RBP13.88□□□□□ -0.19
RNF40-211ENST00000567365 RARRES1P49788 294 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 CLCN3P51790 818 aa13.88□□□□□ -0.19
RNF40-211ENST00000567365 GRIN1Q05586 938 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms