RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 PATJQ8NI35 1801 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 GSG1L2A8MUP6 293 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 LILRB5O75023 590 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 CLASP2O75122 1294 aaKnown RBP11.28□□□□□ -0.6
CAPN3-216ENST00000567071 RETP07949 1114 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 NR3C2P08235 984 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 IFIT2P09913 472 aaKnown RBP11.28□□□□□ -0.6
CAPN3-216ENST00000567071 TGFB3P10600 412 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 GBP2P32456 591 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-216ENST00000567071 SARSP49591 514 aaKnown RBP11.28□□□□□ -0.6
CAPN3-216ENST00000567071 PTPN14Q15678 1187 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 PRR23CQ6ZRP0 262 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 FAM43BQ6ZT52 329 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-216ENST00000567071 CLASRPQ8N2M8 674 aaKnown RBP11.28□□□□□ -0.6
CAPN3-216ENST00000567071 MRPL43Q8N983 215 aaKnown RBP11.28□□□□□ -0.6
CAPN3-216ENST00000567071 GPR152Q8TDT2 470 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 SYTL5Q8TDW5 730 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-216ENST00000567071 CCDC136Q96JN2 1154 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 ZNF558Q96NG5 402 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 STRBPQ96SI9 672 aaKnown RBP11.28□□□□□ -0.6
CAPN3-216ENST00000567071 FAM126AQ9BYI3 521 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-216ENST00000567071 FOXQ1Q9C009 403 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 TYW1Q9NV66 732 aaKnown RBP11.28□□□□□ -0.6
CAPN3-216ENST00000567071 PCDHB15Q9Y5E8 787 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 LOXHD1Q8IVV2 1947 aa11.28□□□□□ -0.6
CAPN3-216ENST00000567071 BPTFQ12830 3046 aa11.27□□□□□ -0.6
CAPN3-216ENST00000567071 C2orf71A6NGG8 1288 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 EIF4E1BA6NMX2 242 aaKnown RBP11.27□□□□□ -0.61
CAPN3-216ENST00000567071 SRRM3A6NNA2 597 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-216ENST00000567071 TAF4O00268 1085 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 GNAT2P19087 354 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 RBM25P49756 843 aaKnown RBP11.27□□□□□ -0.61
CAPN3-216ENST00000567071 ADAM17P78536 824 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 MRPS6P82932 125 aaKnown RBP11.27□□□□□ -0.61
CAPN3-216ENST00000567071 AAMPQ13685 434 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 HSP90AB4PQ58FF6 505 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 IER5Q5VY09 327 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 GPR149Q86SP6 731 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 RTN4RL1Q86UN2 441 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-216ENST00000567071 SLC44A3Q8N4M1 653 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 STAMQ92783 540 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 SFXN1Q9H9B4 322 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 SEMA4GQ9NTN9 838 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 SPG21Q9NZD8 308 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 PADI3Q9ULW8 664 aa11.27□□□□□ -0.61
CAPN3-216ENST00000567071 FRMPD2Q68DX3 1309 aaPredicted RBP11.27□□□□□ -0.61
CAPN3-216ENST00000567071 DENND3A2RUS2 1198 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 HSPD1P10809 573 aaKnown RBP11.26□□□□□ -0.61
CAPN3-216ENST00000567071 MYCLP12524 364 aaPredicted RBP11.26□□□□□ -0.61
CAPN3-216ENST00000567071 GLULP15104 373 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 UBA1P22314 1058 aaKnown RBP11.26□□□□□ -0.61
CAPN3-216ENST00000567071 NRLP54845 237 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 CSRP2Q16527 193 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 LETM2Q2VYF4 491 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 KANK3Q6NY19 840 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 KCNT2Q6UVM3 1135 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 DNAJB3Q8WWF6 145 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 RSAD2Q8WXG1 361 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 NACAP1Q9BZK3 213 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 BOLA2Q9H3K6 86 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 AGO3Q9H9G7 860 aaKnown RBP11.26□□□□□ -0.61
CAPN3-216ENST00000567071 IL1RAPL2Q9NP60 686 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 PXMP2Q9NR77 195 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 TUBE1Q9UJT0 475 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 ABCB11O95342 1321 aa11.26□□□□□ -0.61
CAPN3-216ENST00000567071 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.25□□□□□ -0.61
CAPN3-216ENST00000567071 CXCL14O95715 111 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 PDE4AP27815 886 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 STARD6P59095 220 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 GIT2Q14161 759 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 PPP2R5DQ14738 602 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 UBXN2BQ14CS0 331 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 LPAL2Q16609 132 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 AASDHQ4L235 1098 aaPredicted RBP11.25□□□□□ -0.61
CAPN3-216ENST00000567071 PRR23BQ6ZRT6 265 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 PPFIBP1Q86W92 1011 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 CELF5Q8N6W0 485 aaKnown RBP11.25□□□□□ -0.61
CAPN3-216ENST00000567071 MYL10Q9BUA6 226 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 ATP6V0A4Q9HBG4 840 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 C1orf112Q9NSG2 853 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 EXOC6BQ9Y2D4 811 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 ITPR1Q14643 2758 aa11.25□□□□□ -0.61
CAPN3-216ENST00000567071 KANSL1LA0AUZ9 987 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 NCAM2O15394 837 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 HOXA2O43364 376 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 GDF9O60383 454 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 LRRN2O75325 713 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 EPCAMP16422 314 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 PPFIA1Q13136 1202 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 ODR4Q5SWX8 454 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 FAM102BQ5T8I3 360 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 UTP14CQ5TAP6 766 aaKnown RBP11.24□□□□□ -0.61
CAPN3-216ENST00000567071 CEP85Q6P2H3 762 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 TRIM50Q86XT4 487 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 ZCCHC14Q8WYQ9 949 aaKnown RBP11.24□□□□□ -0.61
CAPN3-216ENST00000567071 OSBPL6Q9BZF3 934 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 BCL11AQ9H165 835 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 CWH43Q9H720 699 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 COL20A1Q9P218 1284 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 HCSTQ9UBK5 93 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms