RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TEKT2Q9UIF3 430 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 PTPREP23469 700 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 SLC7A3Q8WY07 619 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 PPP2R5BQ15173 497 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 PPP6R3Q5H9R7 873 aaPredicted RBP14.97□□□□□ -0.01
SPG11-210ENST00000558319 ZC3H12BQ5HYM0 836 aaKnown RBP14.97□□□□□ -0.01
SPG11-210ENST00000558319 GJC2Q5T442 439 aaPredicted RBP14.97□□□□□ -0.01
SPG11-210ENST00000558319 RETREG2Q8NC44 543 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 CYP4F11Q9HBI6 524 aa14.97□□□□□ -0.01
SPG11-210ENST00000558319 ESRRBO95718 433 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 TTLL1O95922 423 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 MYL1P05976 194 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 ANXA13P27216 316 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 LRRC14Q15048 493 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 RAVER2Q9HCJ3 691 aaKnown RBP14.96□□□□□ -0.01
SPG11-210ENST00000558319 SERPINI2O75830 405 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 SIX6OS1Q8N1H7 587 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 LARP4BQ92615 738 aaKnown RBP14.96□□□□□ -0.01
SPG11-210ENST00000558319 TRIM15Q9C019 465 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 SASH1O94885 1247 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 CYP2D6P10635 497 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 ACCSLQ4AC99 568 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 SH3GL3Q99963 347 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 MMTAG2Q9BU76 263 aaKnown RBP14.96□□□□□ -0.01
SPG11-210ENST00000558319 DBNLQ9UJU6 430 aaKnown RBP14.96□□□□□ -0.01
SPG11-210ENST00000558319 FBXL5Q9UKA1 691 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 MAFGO15525 162 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 ELF1P32519 619 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 ADCY2Q08462 1091 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 NBPF20Q3BBV1 942 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 P2RX5Q93086 422 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 HEMGNQ9BXL5 484 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 ZMYM4Q5VZL5 1548 aa14.96□□□□□ -0.01
SPG11-210ENST00000558319 PEX3P56589 373 aa14.96□□□□□ -0.02
SPG11-210ENST00000558319 CAPRIN1Q14444 709 aaKnown RBP14.96□□□□□ -0.02
SPG11-210ENST00000558319 KRT31Q15323 416 aa14.96□□□□□ -0.02
SPG11-210ENST00000558319 OLFML2BQ68BL8 750 aa14.96□□□□□ -0.02
SPG11-210ENST00000558319 NR1H4Q96RI1 486 aaPredicted RBP14.96□□□□□ -0.02
SPG11-210ENST00000558319 PCDHA4Q9UN74 947 aa14.96□□□□□ -0.02
SPG11-210ENST00000558319 GFAPP14136 432 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 PMLP29590 882 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 PDXDC2PQ6P474 469 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 SAYSD1Q9NPB0 183 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 FGFR1OP2Q9NVK5 253 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 SNX5Q9Y5X3 404 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 COL17A1Q9UMD9 1497 aaPredicted RBP14.95□□□□□ -0.02
SPG11-210ENST00000558319 TTI1O43156 1089 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 RNF139Q8WU17 664 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 AFG1LQ8WV93 481 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 RXRBP28702 533 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 MDH1BQ5I0G3 518 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 SYDE2Q5VT97 1194 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 SLC10A4Q96EP9 437 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 TMEM60Q9H2L4 133 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 ZFYVE9O95405 1425 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 NMT2O60551 498 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 SRGAP2BP0DMP2 458 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 PSMC2P35998 433 aaKnown RBP14.95□□□□□ -0.02
SPG11-210ENST00000558319 MDM2Q00987 491 aaPredicted RBP14.95□□□□□ -0.02
SPG11-210ENST00000558319 SPARCL1Q14515 664 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 SLC9A5Q14940 896 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 SEPT2Q15019 361 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 FBXW10Q5XX13 1052 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 STX18Q9P2W9 335 aaKnown RBP14.95□□□□□ -0.02
SPG11-210ENST00000558319 RGS12O14924 1447 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 VCPP55072 806 aaKnown RBP14.95□□□□□ -0.02
SPG11-210ENST00000558319 TSPY1Q01534 308 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 EPM2AIP1Q7L775 607 aaPredicted RBP14.95□□□□□ -0.02
SPG11-210ENST00000558319 TRIM55Q9BYV6 548 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 ERBB3P21860 1342 aa14.95□□□□□ -0.02
SPG11-210ENST00000558319 RASA4BC9J798 803 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 RASA4O43374 803 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 ATP1A3P13637 1013 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 SOX11P35716 441 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 SF3B3Q15393 1217 aaKnown RBP14.94□□□□□ -0.02
SPG11-210ENST00000558319 CYTH1Q15438 398 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 RNF135Q8IUD6 432 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 ICA1LQ8NDH6 482 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 AGR3Q8TD06 166 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 AMNQ9BXJ7 453 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 SNX24Q9Y343 169 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 ABCB11O95342 1321 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 VSTM4Q8IW00 320 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 RBM46Q8TBY0 533 aaKnown RBP14.94□□□□□ -0.02
SPG11-210ENST00000558319 MAP3K15Q6ZN16 1313 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 IQANK1A0A1B0GTG1 560 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 AP2B1P63010 937 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 ZNF280CQ8ND82 737 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 ATXN7L3BQ96GX2 97 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 NUDCD1Q96RS6 583 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 KIFC3Q9BVG8 833 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 KLC4Q9NSK0 619 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 ATP6V1E1P36543 226 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 ZNF658Q5TYW1 1059 aaPredicted RBP14.94□□□□□ -0.02
SPG11-210ENST00000558319 CC2D1AQ6P1N0 951 aaPredicted RBP14.94□□□□□ -0.02
SPG11-210ENST00000558319 DNAJC24Q6P3W2 148 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 SLC26A7Q8TE54 656 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 GIPC2Q8TF65 315 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 ADAM33Q9BZ11 813 aa14.94□□□□□ -0.02
SPG11-210ENST00000558319 ADA2Q9NZK5 511 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms