RNA–Protein interactions for RNA: ENST00000558298.5

RTF1-205, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene RTF1, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-205ENST00000558298 B4GALNT4Q76KP1 1039 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 ANKRD33Q7Z3H0 272 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 NLRX1Q86UT6 975 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 SESTD1Q86VW0 696 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 FMNL3Q8IVF7 1028 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 ELOA2Q8IYF1 753 aaPredicted RBP8.89□□□□□ -0.99
RTF1-205ENST00000558298 MSANTD4Q8NCY6 345 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 KCNG4Q8TDN1 519 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 CCDC34Q96HJ3 373 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 MBOAT7Q96N66 472 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 TOX2Q96NM4 488 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 JADE2Q9NQC1 790 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 PDLIM7Q9NR12 457 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 POLR3EQ9NVU0 708 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 PCDH10Q9P2E7 1040 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 ZMYND8Q9ULU4 1186 aaPredicted RBP8.89□□□□□ -0.99
RTF1-205ENST00000558298 MRFAP1Q9Y605 127 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 TANC1Q9C0D5 1861 aa8.89□□□□□ -0.99
RTF1-205ENST00000558298 MYH15Q9Y2K3 1946 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 IGLV3-22A0A075B6J6 115 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 CYP3A7-CYP3A51PA0A087WV96 503 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 MEIS1O00470 390 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 PES1O00541 588 aaKnown RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 EBAG9O00559 213 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 PPP1R12AO14974 1030 aaPredicted RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 ERLIN2O94905 339 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 F2P00734 622 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 ASGR1P07306 291 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 C6orf222P0C671 652 aaPredicted RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 TXNP10599 105 aaKnown RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 KCNA2P16389 499 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 ITGB5P18084 799 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 CYP3A7P24462 503 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 ARHGAP25P42331 645 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 MAGEA10P43363 369 aaPredicted RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 AARSP49588 968 aaKnown RBP eCLIP8.88□□□□□ -0.99
RTF1-205ENST00000558298 ARHGAP4P98171 946 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 PURAQ00577 322 aaKnown RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 PTPN11Q06124 597 aaPredicted RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 STK3Q13188 491 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 GNL2Q13823 731 aaKnown RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 NAA30Q147X3 362 aaPredicted RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 PLCB4Q15147 1175 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 KCNA10Q16322 511 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 UBE2SQ16763 222 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 WHAMMP3Q1A5X7 153 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 NBPF20Q3BBV1 942 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 TRIM60Q495X7 471 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 CELF3Q5SZQ8 465 aaKnown RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 MYSM1Q5VVJ2 828 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 IQCEQ6IPM2 695 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 NOL8Q76FK4 1167 aaKnown RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 KRT25Q7Z3Z0 450 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 SRGAP1Q7Z6B7 1085 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 TAX1BP1Q86VP1 789 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 BLIDQ8IZY5 108 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 MICALL1Q8N3F8 863 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 MRPS27Q92552 414 aaKnown RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 TNFRSF25Q93038 417 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 GLT1D1Q96MS3 346 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 MXRA8Q9BRK3 442 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 AP5M1Q9H0R1 490 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 TMX1Q9H3N1 280 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 VPS54Q9P1Q0 977 aa8.88□□□□□ -0.99
RTF1-205ENST00000558298 LAMA2P24043 3122 aaKnown RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 MYH9P35579 1960 aaKnown RBP8.88□□□□□ -0.99
RTF1-205ENST00000558298 GRIN2DO15399 1336 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 EMSYQ7Z589 1322 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 TRIM43BA6NCK2 446 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 SRRM3A6NNA2 597 aaPredicted RBP8.87□□□□□ -0.99
RTF1-205ENST00000558298 USP27XA6NNY8 438 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 KIF5CO60282 957 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 NR1I2O75469 434 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 MMP1P03956 469 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 MMP3P08254 477 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 GCFC2P16383 781 aaKnown RBP8.87□□□□□ -0.99
RTF1-205ENST00000558298 SYN1P17600 705 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 ITGB8P26012 769 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 HOXC8P31273 242 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 ATN1P54259 1190 aaPredicted RBP8.87□□□□□ -0.99
RTF1-205ENST00000558298 CHMP4BP1P59074 171 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 ORC2Q13416 577 aaPredicted RBP8.87□□□□□ -0.99
RTF1-205ENST00000558298 DRP2Q13474 957 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 MTMR1Q13613 665 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 PPP4R3AQ6IN85 833 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 CCDC70Q6NSX1 233 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 NFRKBQ6P4R8 1299 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 EEPD1Q7L9B9 569 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 SH3RF1Q7Z6J0 888 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 REXO1L1PQ8IX06 675 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 DHX40Q8IX18 779 aaKnown RBP8.87□□□□□ -0.99
RTF1-205ENST00000558298 NECAB1Q8N987 351 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 OR6J1Q8NGC5 347 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 GIMAP7Q8NHV1 300 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 FERMT2Q96AC1 680 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 LENG9Q96B70 501 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 TRIM43Q96BQ3 446 aaPredicted RBP8.87□□□□□ -0.99
RTF1-205ENST00000558298 CCDC51Q96ER9 411 aa8.87□□□□□ -0.99
RTF1-205ENST00000558298 NAP1L4Q99733 375 aaKnown RBP8.87□□□□□ -0.99
RTF1-205ENST00000558298 SDF4Q9BRK5 362 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms