RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 SEMA3FQ13275 785 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 BFSP2Q13515 415 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 UBE2SQ16763 222 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 GNPTABQ3T906 1256 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 APOA5Q6Q788 366 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 CYFIP1Q7L576 1253 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 HEATR3Q7Z4Q2 680 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 SESTD1Q86VW0 696 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 SGMS1Q86VZ5 419 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 VWA5B2Q8N398 1253 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 SVOPQ8N4V2 548 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 MAFAQ8NHW3 353 aaPredicted RBP8.66□□□□□ -1.02
SPG11-205ENST00000558080 RNF217Q8TC41 542 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 DHX38Q92620 1227 aaKnown RBP8.66□□□□□ -1.02
SPG11-205ENST00000558080 CTAGE1Q96RT6 745 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 INSM2Q96T92 566 aaPredicted RBP8.66□□□□□ -1.02
SPG11-205ENST00000558080 KATNAL1Q9BW62 490 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 NKX2-4Q9H2Z4 354 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 GTF2IRD1Q9UHL9 959 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 YBX2Q9Y2T7 364 aaKnown RBP8.66□□□□□ -1.02
SPG11-205ENST00000558080 A0A0C4DFX4 3053 aa8.66□□□□□ -1.02
SPG11-205ENST00000558080 TRANK1O15050 2925 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 CNTNAP5Q8WYK1 1306 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 KLF18A0A0U1RQI7 1052 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 PIK3CDO00329 1044 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 NOP56O00567 594 aaKnown RBP8.65□□□□□ -1.02
SPG11-205ENST00000558080 ZBTB43O43298 467 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 STAM2O75886 525 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 F2P00734 622 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 PFKMP08237 780 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 ACTN1P12814 892 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 HOXD8P13378 290 aaPredicted RBP8.65□□□□□ -1.02
SPG11-205ENST00000558080 MYOGP15173 224 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 ICAM3P32942 547 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 RFC2P35250 354 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 FGD1P98174 961 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 PTK2Q05397 1052 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 NEDD9Q14511 834 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 KRT32Q14532 448 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 NR6A1Q15406 480 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 RAB30Q15771 203 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 RTN1Q16799 776 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 TSGA10IPQ3SY00 556 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 UTP14CQ5TAP6 766 aaKnown RBP8.65□□□□□ -1.02
SPG11-205ENST00000558080 PCNX4Q63HM2 1172 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 SV2AQ7L0J3 742 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 INPP4AQ96PE3 977 aaPredicted RBP8.65□□□□□ -1.02
SPG11-205ENST00000558080 C16orf70Q9BSU1 422 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 PRDM12Q9H4Q4 367 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 RBM28Q9NW13 759 aaKnown RBP8.65□□□□□ -1.02
SPG11-205ENST00000558080 TELO2Q9Y4R8 837 aa8.65□□□□□ -1.02
SPG11-205ENST00000558080 GOLGA8AA7E2F4 631 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 GOLGA8BA8MQT2 603 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 H3BRB1 525 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 DLL1O00548 723 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 FIBPO43427 364 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 EIF5BO60841 1220 aaKnown RBP8.64□□□□□ -1.03
SPG11-205ENST00000558080 ARHGEF15O94989 841 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 LGALS2P05162 132 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 CKBP12277 381 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 SELPP16109 830 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 ATP2A2P16615 1042 aaKnown RBP8.64□□□□□ -1.03
SPG11-205ENST00000558080 CDC27P30260 824 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 NAPAP54920 295 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 APOBRQ0VD83 1088 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 PTK7Q13308 1070 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 SKIV2LQ15477 1246 aaKnown RBP8.64□□□□□ -1.03
SPG11-205ENST00000558080 PPP2R2DQ66LE6 453 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 WWC2Q6AWC2 1192 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 XRRA1Q6P2D8 792 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 Q6ZUG5 572 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 LRRC8DQ7L1W4 858 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 NLRX1Q86UT6 975 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 CAGE1Q8TC20 777 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 ADAM32Q8TC27 787 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 AFAP1L1Q8TED9 768 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 WHAMMQ8TF30 809 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 WNT8BQ93098 351 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 PGBD1Q96JS3 809 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 JAKMIP1Q96N16 626 aaKnown RBP8.64□□□□□ -1.03
SPG11-205ENST00000558080 GPR20Q99678 358 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 TUT1Q9H6E5 874 aaKnown RBP8.64□□□□□ -1.03
SPG11-205ENST00000558080 SLC28A3Q9HAS3 691 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 UPF2Q9HAU5 1272 aaKnown RBP8.64□□□□□ -1.03
SPG11-205ENST00000558080 PCDHA6Q9UN73 950 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 PCDHA8Q9Y5H6 950 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 SNX14Q9Y5W7 946 aa8.64□□□□□ -1.03
SPG11-205ENST00000558080 COL4A4P53420 1690 aaPredicted RBP8.63□□□□□ -1.03
SPG11-205ENST00000558080 C17orf102A2RUQ5 167 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 CDC14CA4D256 554 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 SPDYE3A6NKU9 549 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 NBNO60934 754 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 ATP9AO75110 1047 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 HMGB1P09429 215 aaKnown RBP8.63□□□□□ -1.03
SPG11-205ENST00000558080 SMIM10L2AP0DMW4 78 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 SMIM10L2BP0DMW5 78 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 HSPA4P34932 840 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 ADD1P35611 737 aaKnown RBP8.63□□□□□ -1.03
SPG11-205ENST00000558080 GPNMBQ14956 572 aa8.63□□□□□ -1.03
SPG11-205ENST00000558080 TCTN1Q2MV58 587 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms