RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 GOLPH3LQ9H4A5 285 aa17.07■□□□□ 0.32
NEDD1-213ENST00000557644 C17orf102A2RUQ5 167 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 TREHO43280 583 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 B4GALT4O60513 344 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 PRPF40AO75400 957 aaKnown RBP17.06■□□□□ 0.32
NEDD1-213ENST00000557644 MUTP22033 750 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 HOXC8P31273 242 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 RARRES1P49788 294 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 ADAM17P78536 824 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 TARBP2Q15633 366 aaKnown RBP17.06■□□□□ 0.32
NEDD1-213ENST00000557644 XKR9Q5GH70 373 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 TMEM87AQ8NBN3 555 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 NT5C3AQ9H0P0 336 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 BHMT2Q9H2M3 363 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 CYP26B1Q9NR63 512 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 BMP2KQ9NSY1 1161 aaPredicted RBP17.06■□□□□ 0.32
NEDD1-213ENST00000557644 PFKFB1P16118 471 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 SNX17Q15036 470 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 NAALADL2Q58DX5 795 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 OTUD6AQ7L8S5 288 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 FSIP1Q8NA03 581 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 GBP4Q96PP9 640 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 BLOC1S4Q9NUP1 217 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 DNM3Q9UQ16 869 aa17.06■□□□□ 0.32
NEDD1-213ENST00000557644 A0A1W2PQ27 194 aa17.05■□□□□ 0.32
NEDD1-213ENST00000557644 A0A1W2PQ64 194 aa17.05■□□□□ 0.32
NEDD1-213ENST00000557644 A0A1W2PQD8 194 aa17.05■□□□□ 0.32
NEDD1-213ENST00000557644 GOLGA6L4A6NEF3 574 aa17.05■□□□□ 0.32
NEDD1-213ENST00000557644 NDUFA8P51970 172 aa17.05■□□□□ 0.32
NEDD1-213ENST00000557644 CSPP1Q1MSJ5 1256 aa17.05■□□□□ 0.32
NEDD1-213ENST00000557644 RRAGBQ5VZM2 374 aa17.05■□□□□ 0.32
NEDD1-213ENST00000557644 FAM126BQ8IXS8 530 aa17.05■□□□□ 0.32
NEDD1-213ENST00000557644 ANKEF1Q9NU02 776 aa17.05■□□□□ 0.32
NEDD1-213ENST00000557644 FAM13BQ9NYF5 915 aa17.05■□□□□ 0.32
NEDD1-213ENST00000557644 CCDC39Q9UFE4 941 aa17.05■□□□□ 0.32
NEDD1-213ENST00000557644 KCNH3Q9ULD8 1083 aa17.05■□□□□ 0.32
NEDD1-213ENST00000557644 ATP11BQ9Y2G3 1177 aa17.05■□□□□ 0.32
NEDD1-213ENST00000557644 RBAK-RBAKDNI3L0D1 243 aa17.04■□□□□ 0.32
NEDD1-213ENST00000557644 POLR2DO15514 142 aaKnown RBP17.04■□□□□ 0.32
NEDD1-213ENST00000557644 KLRC1P26715 233 aa17.04■□□□□ 0.32
NEDD1-213ENST00000557644 RTP1P59025 263 aa17.04■□□□□ 0.32
NEDD1-213ENST00000557644 TLE2Q04725 743 aa17.04■□□□□ 0.32
NEDD1-213ENST00000557644 PTGISQ16647 500 aa17.04■□□□□ 0.32
NEDD1-213ENST00000557644 ZNF484Q5JVG2 852 aa17.04■□□□□ 0.32
NEDD1-213ENST00000557644 MRPS27Q92552 414 aaKnown RBP17.04■□□□□ 0.32
NEDD1-213ENST00000557644 TUBE1Q9UJT0 475 aa17.04■□□□□ 0.32
NEDD1-213ENST00000557644 C22orf31O95567 290 aa17.04■□□□□ 0.32
NEDD1-213ENST00000557644 EYA4O95677 639 aa17.04■□□□□ 0.32
NEDD1-213ENST00000557644 XRCC6P12956 609 aaKnown RBP eCLIP17.04■□□□□ 0.32
NEDD1-213ENST00000557644 DHX8Q14562 1220 aaKnown RBP17.04■□□□□ 0.32
NEDD1-213ENST00000557644 C1orf53Q5VUE5 145 aa17.04■□□□□ 0.32
NEDD1-213ENST00000557644 DHX58Q96C10 678 aa17.04■□□□□ 0.32
NEDD1-213ENST00000557644 DBR1Q9UK59 544 aaKnown RBP17.04■□□□□ 0.32
NEDD1-213ENST00000557644 HPSEQ9Y251 543 aa17.04■□□□□ 0.32
NEDD1-213ENST00000557644 MBLAC1A4D2B0 266 aaPredicted RBP17.03■□□□□ 0.32
NEDD1-213ENST00000557644 RRN3P2A6NIE6 340 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 SLC26A4O43511 780 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 SSBP05455 408 aaKnown RBP eCLIP17.03■□□□□ 0.32
NEDD1-213ENST00000557644 STAT6P42226 847 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 PTPN11Q06124 597 aaPredicted RBP17.03■□□□□ 0.32
NEDD1-213ENST00000557644 MCM6Q14566 821 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 E2F4Q16254 413 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 MTHFD1LQ6UB35 978 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 RUFY4Q6ZNE9 571 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 CCDC73Q6ZRK6 1079 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 ANKRD33Q7Z3H0 272 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 WNT8BQ93098 351 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 CCDC43Q96MW1 224 aaKnown RBP17.03■□□□□ 0.32
NEDD1-213ENST00000557644 PCDH10Q9P2E7 1040 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 TRIP12Q14669 1992 aaPredicted RBP17.03■□□□□ 0.32
NEDD1-213ENST00000557644 COL1A2P08123 1366 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 PLA2G4BP0C869 781 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 GNAT1P11488 350 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 CYP2C9P11712 490 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 TBC1D8BQ0IIM8 1120 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 LRRC71Q8N4P6 559 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 RAD54LQ92698 747 aa17.03■□□□□ 0.32
NEDD1-213ENST00000557644 ARHGEF35A5YM69 484 aa17.02■□□□□ 0.32
NEDD1-213ENST00000557644 USO1O60763 962 aaKnown RBP17.02■□□□□ 0.32
NEDD1-213ENST00000557644 CD4P01730 458 aa17.02■□□□□ 0.32
NEDD1-213ENST00000557644 SLC12A3P55017 1021 aa17.02■□□□□ 0.32
NEDD1-213ENST00000557644 DRP2Q13474 957 aa17.02■□□□□ 0.32
NEDD1-213ENST00000557644 METTL13Q8N6R0 699 aa17.02■□□□□ 0.32
NEDD1-213ENST00000557644 SUGCTQ9HAC7 445 aa17.02■□□□□ 0.32
NEDD1-213ENST00000557644 POLD4Q9HCU8 107 aa17.02■□□□□ 0.32
NEDD1-213ENST00000557644 NOD1Q9Y239 953 aa17.02■□□□□ 0.32
NEDD1-213ENST00000557644 KAT6AQ92794 2004 aa17.02■□□□□ 0.32
NEDD1-213ENST00000557644 FAM237AA0A1B0GTK4 181 aa17.02■□□□□ 0.31
NEDD1-213ENST00000557644 CAPN15O75808 1086 aa17.02■□□□□ 0.31
NEDD1-213ENST00000557644 CLCN3P51790 818 aa17.02■□□□□ 0.31
NEDD1-213ENST00000557644 POLGP54098 1239 aaPredicted RBP17.02■□□□□ 0.31
NEDD1-213ENST00000557644 FAAP100Q0VG06 881 aa17.02■□□□□ 0.31
NEDD1-213ENST00000557644 PADI6Q6TGC4 694 aa17.02■□□□□ 0.31
NEDD1-213ENST00000557644 MAEAQ7L5Y9 396 aa17.02■□□□□ 0.31
NEDD1-213ENST00000557644 LARP4BQ92615 738 aaKnown RBP17.02■□□□□ 0.31
NEDD1-213ENST00000557644 RUSC1Q9BVN2 902 aa17.02■□□□□ 0.31
NEDD1-213ENST00000557644 DHX33Q9H6R0 707 aaKnown RBP17.02■□□□□ 0.31
NEDD1-213ENST00000557644 MROH7Q68CQ1 1323 aa17.02■□□□□ 0.31
NEDD1-213ENST00000557644 LIG1P18858 919 aa17.01■□□□□ 0.31
NEDD1-213ENST00000557644 SYKP43405 635 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms