RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 UBE2SQ16763 222 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 PRSS36Q5K4E3 855 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 C1orf53Q5VUE5 145 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 MCTP1Q6DN14 999 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 FAM160B2Q86V87 743 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 C7orf61Q8IZ16 206 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 FBXO18Q8NFZ0 1043 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 CHURC1Q8WUH1 139 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 LPAR1Q92633 364 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 TNPO1Q92973 898 aaKnown RBP6.08□□□□□ -1.44
ATXN3-244ENST00000556898 COL26A1Q96A83 441 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 PHF20Q9BVI0 1012 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 UBE2OQ9C0C9 1292 aaKnown RBP6.08□□□□□ -1.44
ATXN3-244ENST00000556898 ASCC2Q9H1I8 757 aaPredicted RBP6.08□□□□□ -1.44
ATXN3-244ENST00000556898 TXNRD2Q9NNW7 524 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 BTBD7Q9P203 1132 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 SEC63Q9UGP8 760 aaKnown RBP6.08□□□□□ -1.44
ATXN3-244ENST00000556898 AGTPBP1Q9UPW5 1226 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 SLC45A1Q9Y2W3 748 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 HCN4Q9Y3Q4 1203 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 RIPK3Q9Y572 518 aa6.08□□□□□ -1.44
ATXN3-244ENST00000556898 CENPFP49454 3210 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 RPTORQ8N122 1335 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 SCO2A0A1W2PP80 73 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 SMCO2A6NFE2 343 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 VWA5AO00534 786 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 OPLAHO14841 1288 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 PRMT3O60678 531 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 PLA2G6O60733 806 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 LGR5O75473 907 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 MMP1P03956 469 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 ALAS1P13196 640 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 SELPP16109 830 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 PDE4CQ08493 712 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 COG2Q14746 738 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 TMEM132BQ14DG7 1078 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 MUM1L1Q5H9M0 696 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 JAKMIP3Q5VZ66 844 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 FBXO11Q86XK2 927 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 KRTAP1-3Q8IUG1 177 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 DIS3L2Q8IYB7 885 aaKnown RBP6.07□□□□□ -1.44
ATXN3-244ENST00000556898 PRPF38AQ8NAV1 312 aaKnown RBP6.07□□□□□ -1.44
ATXN3-244ENST00000556898 WASF1Q92558 559 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 PAGR1Q9BTK6 254 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 AMNQ9BXJ7 453 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 FTOQ9C0B1 505 aaKnown RBP eCLIP6.07□□□□□ -1.44
ATXN3-244ENST00000556898 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.07□□□□□ -1.441e-11■■■■□ 25.2
ATXN3-244ENST00000556898 C11orf49Q9H6J7 331 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 SLC38A10Q9HBR0 1119 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 HOMER2Q9NSB8 354 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 BARHL2Q9NY43 387 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 RBPJLQ9UBG7 517 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 CCPG1Q9ULG6 757 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 PCDHA6Q9UN73 950 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 ADAMTS5Q9UNA0 930 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 PCDHA8Q9Y5H6 950 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 PCDHA1Q9Y5I3 950 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 LOC285556D6RIA3 1793 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 CEP290O15078 2479 aa6.07□□□□□ -1.44
ATXN3-244ENST00000556898 NFIBO00712 420 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 EDIL3O43854 480 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 ZBED4O75132 1171 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 ICAM1P05362 532 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 SYN1P17600 705 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 ATP2B1P20020 1258 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 HOXA7P31268 230 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-244ENST00000556898 HOXA13P31271 388 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-244ENST00000556898 KRT2P35908 639 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 HERVK_113P62684 666 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 IRX3P78415 501 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-244ENST00000556898 NUCB2P80303 420 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 DNM1Q05193 864 aaKnown RBP6.06□□□□□ -1.44
ATXN3-244ENST00000556898 TRIM29Q14134 588 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 PLS1Q14651 629 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 ARTNQ5T4W7 220 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 USP17L6PQ6QN14 398 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 BLIDQ8IZY5 108 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 SMCR8Q8TEV9 937 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-244ENST00000556898 DIS3LQ8TF46 1054 aaKnown RBP6.06□□□□□ -1.44
ATXN3-244ENST00000556898 CLEC4DQ8WXI8 215 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 PRIMPOLQ96LW4 560 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 CEP63Q96MT8 703 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 NEUROD4Q9HD90 331 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 BRD7Q9NPI1 651 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 ZNF214Q9UL59 606 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-244ENST00000556898 OGDHLQ9ULD0 1010 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 PCDHA4Q9UN74 947 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 CNPY2Q9Y2B0 182 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 MRVI1Q9Y6F6 885 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 DDX49Q9Y6V7 483 aaKnown RBP6.06□□□□□ -1.44
ATXN3-244ENST00000556898 A0A0C4DFX4 3053 aa6.06□□□□□ -1.44
ATXN3-244ENST00000556898 RANBP2P49792 3224 aaKnown RBP6.06□□□□□ -1.44
ATXN3-244ENST00000556898 PTPRFP10586 1907 aa6.05□□□□□ -1.44
ATXN3-244ENST00000556898 RLFQ13129 1914 aa6.05□□□□□ -1.44
ATXN3-244ENST00000556898 CARNS1A5YM72 827 aa6.05□□□□□ -1.44
ATXN3-244ENST00000556898 MEIS2O14770 477 aa6.05□□□□□ -1.44
ATXN3-244ENST00000556898 BAG4O95429 457 aaKnown RBP6.05□□□□□ -1.44
ATXN3-244ENST00000556898 CFBP00751 764 aa6.05□□□□□ -1.44
ATXN3-244ENST00000556898 HMGCRP04035 888 aa6.05□□□□□ -1.44
ATXN3-244ENST00000556898 PDCP20941 246 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms