RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 NEK2P51955 445 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 HERVK_113P62684 666 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 SLC6A3Q01959 620 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 CACNB2Q08289 660 aaPredicted RBP6.94□□□□□ -1.3
CHD8-207ENST00000554384 GPR158Q5T848 1215 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 PGM2L1Q6PCE3 622 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 FRMD7Q6ZUT3 714 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 FMNL3Q8IVF7 1028 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 SMARCC2Q8TAQ2 1214 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 LMBR1Q8WVP7 490 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 HOOK2Q96ED9 719 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 SCYL1Q96KG9 808 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 ZSWIM3Q96MP5 696 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 TUBGCP5Q96RT8 1024 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 EPB41L4BQ9H329 900 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 AASDHPPTQ9NRN7 309 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 IRS2Q9Y4H2 1338 aa6.94□□□□□ -1.3
CHD8-207ENST00000554384 SHTN1A0MZ66 631 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 ZNF839A8K0R7 811 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 PCDHGA12O60330 932 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 NCAM1P13591 858 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 PTGS1P23219 599 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 LIMS1P48059 325 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 NKX3-2P78367 333 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 MYBPC3Q14896 1274 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 ODF1Q14990 250 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 RTP5Q14D33 572 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 ZBTB41Q5SVQ8 909 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 TMEM132EQ6IEE7 984 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 IGDCC3Q8IVU1 814 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 NOX5Q96PH1 765 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 MENTQ9BUN1 341 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 CHPF2Q9P2E5 772 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 PCDHGA9Q9Y5G4 932 aaKnown RBP6.93□□□□□ -1.3
CHD8-207ENST00000554384 PCDHGA8Q9Y5G5 932 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 PCDHGA7Q9Y5G6 932 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 PCDHGA6Q9Y5G7 932 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 PCDHGA3Q9Y5H0 932 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 PCDHGA2Q9Y5H1 932 aa6.93□□□□□ -1.3
CHD8-207ENST00000554384 UBA6A0AVT1 1052 aaPredicted RBP6.92□□□□□ -1.3
CHD8-207ENST00000554384 PRSS38A1L453 326 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 LRRC10BA6NIK2 292 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 AKAP10O43572 662 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 PRPF6O94906 941 aaKnown RBP6.92□□□□□ -1.3
CHD8-207ENST00000554384 SKIDA1Q1XH10 827 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 PRAMEF9Q5VWM5 478 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 CCDC62Q6P9F0 684 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 CXorf67Q86X51 503 aaPredicted RBP6.92□□□□□ -1.3
CHD8-207ENST00000554384 ZZZ3Q8IYH5 903 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 C1orf162Q8NEQ5 155 aaPredicted RBP6.92□□□□□ -1.3
CHD8-207ENST00000554384 MZB1Q8WU39 189 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 CPA5Q8WXQ8 436 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 EAF2Q96CJ1 260 aaPredicted RBP6.92□□□□□ -1.3
CHD8-207ENST00000554384 FAXDC2Q96IV6 333 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 GORASP1Q9BQQ3 440 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 GCM1Q9NP62 436 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 ASB1Q9Y576 335 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 PPP2R3BQ9Y5P8 575 aa6.92□□□□□ -1.3
CHD8-207ENST00000554384 HRKO00198 91 aa6.91□□□□□ -1.3
CHD8-207ENST00000554384 IL18BPO95998 194 aa6.91□□□□□ -1.3
CHD8-207ENST00000554384 LPLP06858 475 aa6.91□□□□□ -1.3
CHD8-207ENST00000554384 ENO2P09104 434 aaPredicted RBP6.91□□□□□ -1.3
CHD8-207ENST00000554384 MOGSQ13724 837 aa6.91□□□□□ -1.3
CHD8-207ENST00000554384 NOLC1Q14978 699 aaKnown RBP eCLIP6.91□□□□□ -1.3
CHD8-207ENST00000554384 TTC38Q5R3I4 469 aa6.91□□□□□ -1.3
CHD8-207ENST00000554384 OLFML2BQ68BL8 750 aa6.91□□□□□ -1.3
CHD8-207ENST00000554384 VASNQ6EMK4 673 aa6.91□□□□□ -1.3
CHD8-207ENST00000554384 ZBTB46Q86UZ6 589 aa6.91□□□□□ -1.3
CHD8-207ENST00000554384 ZC3H18Q86VM9 953 aaKnown RBP6.91□□□□□ -1.3
CHD8-207ENST00000554384 C7orf31Q8N865 590 aa6.91□□□□□ -1.3
CHD8-207ENST00000554384 MAML3Q96JK9 1138 aa6.91□□□□□ -1.3
CHD8-207ENST00000554384 RTFDC1Q9BY42 306 aaPredicted RBP6.91□□□□□ -1.3
CHD8-207ENST00000554384 INCENPQ9NQS7 918 aa6.91□□□□□ -1.3
CHD8-207ENST00000554384 HSPBP1Q9NZL4 362 aa6.91□□□□□ -1.3
CHD8-207ENST00000554384 WASHC2AQ641Q2 1341 aa6.91□□□□□ -1.3
CHD8-207ENST00000554384 PRLP01236 227 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 IGFBP6P24592 240 aaPredicted RBP6.9□□□□□ -1.3
CHD8-207ENST00000554384 EPHB1P54762 984 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 MANFP55145 182 aaKnown RBP6.9□□□□□ -1.3
CHD8-207ENST00000554384 ITGA1P56199 1179 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 SRSF2Q01130 221 aaKnown RBP6.9□□□□□ -1.3
CHD8-207ENST00000554384 ALDH6A1Q02252 535 aaKnown RBP6.9□□□□□ -1.3
CHD8-207ENST00000554384 ADCY1Q08828 1119 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 FAPQ12884 760 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 CLUL1Q15846 466 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 TOR2AQ5JU69 321 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 SLFN12LQ6IEE8 588 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 ESPNLQ6ZVH7 1005 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 B3GNT8Q7Z7M8 397 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 PHYKPLQ8IUZ5 450 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 DTX3Q8N9I9 347 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 CHMP4CQ96CF2 233 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 SLC2A13Q96QE2 648 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 TACO1Q9BSH4 297 aaKnown RBP6.9□□□□□ -1.3
CHD8-207ENST00000554384 QRSL1Q9H0R6 528 aaKnown RBP6.9□□□□□ -1.3
CHD8-207ENST00000554384 CCM2LQ9NUG4 571 aaPredicted RBP6.9□□□□□ -1.3
CHD8-207ENST00000554384 MKS1Q9NXB0 559 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 ZIM2Q9NZV7 527 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 IP6K2Q9UHH9 426 aa6.9□□□□□ -1.3
CHD8-207ENST00000554384 MAGEL2Q9UJ55 1249 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms