RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 FDX1P10109 184 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 NUBP1P53384 320 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 SP2Q02086 613 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 GPM6BQ13491 265 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 STK38Q15208 465 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 GRIK4Q16099 956 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 ZNF792Q3KQV3 632 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 MFSD5Q6N075 450 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 MIS18BP1Q6P0N0 1132 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 FBXO22Q8NEZ5 403 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 OXER1Q8TDS5 423 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 MAP4K1Q92918 833 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 BHMTQ93088 406 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 B3GALT6Q96L58 329 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 KIFC3Q9BVG8 833 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 TEKT3Q9BXF9 490 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 SEMA6BQ9H3T3 888 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 SMARCAD1Q9H4L7 1026 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 LY9Q9HBG7 655 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 MAD2L2Q9UI95 211 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 CDH22Q9UJ99 828 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 OGDHLQ9ULD0 1010 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 NOL7Q9UMY1 257 aaKnown RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 SPAG17Q6Q759 2223 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 ATRNL1Q5VV63 1379 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 ZNF318Q5VUA4 2279 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 COL5A3P25940 1745 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 A0A087WZ62 844 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 I3L4J1 428 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 AGRPO00253 132 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 SH2B2O14492 632 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 TIMP1P01033 207 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 PTMAP06454 111 aaKnown RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 MMP3P08254 477 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 SELPP16109 830 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 AKAP5P24588 427 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 KLRC2P26717 231 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 GTF2F1P35269 517 aaKnown RBP eCLIP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 ME1P48163 572 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 NRIP1P48552 1158 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 ANTXR2P58335 489 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 PURAQ00577 322 aaKnown RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 KRT17Q04695 432 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 TROAPQ12815 778 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 HIC1Q14526 733 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 CALCRLQ16602 461 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 LPAL2Q16609 132 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 TKFCQ3LXA3 575 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 BMP2KLQ5H9B9 411 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 PSRC1Q6PGN9 363 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 HS6ST3Q8IZP7 471 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 BLIDQ8IZY5 108 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 GMCL1P1Q8NEA9 526 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 DEPTORQ8TB45 409 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 BICD2Q8TD16 824 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 LMBR1Q8WVP7 490 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 SPOCK2Q92563 424 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 CPB2Q96IY4 423 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 CDHR1Q96JP9 859 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 C12orf42Q96LP6 360 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 FDXACB1Q9BRP7 624 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 TTC12Q9H892 705 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 ATP6V0A4Q9HBG4 840 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 GDPD2Q9HCC8 539 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 ZCCHC17Q9NP64 241 aaKnown RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 GINM1Q9NU53 330 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 DDX41Q9UJV9 622 aaKnown RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 MAGED2Q9UNF1 606 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 HCN4Q9Y3Q4 1203 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 SCN4AP35499 1836 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 TCF20Q9UGU0 1960 aaKnown RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 WDR90Q96KV7 1748 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 ZNF536O15090 1300 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 ADGRA2Q96PE1 1338 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 CASTOR2A6NHX0 329 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 PPP1R11O60927 126 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 NR1I2O75469 434 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 PSAPP07602 524 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 CKBP12277 381 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 RPL17P18621 184 aaKnown RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 RPS6KB1P23443 525 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 PDIA3P30101 505 aaKnown RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 ELF1P32519 619 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 KRT2P35908 639 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 AFMP43652 599 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 GLIPR1L2Q4G1C9 344 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 MYSM1Q5VVJ2 828 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 TMTC3Q6ZXV5 915 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 RUFY3Q7L099 469 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 USP37Q86T82 979 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 VSIG10LQ86VR7 867 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 NOSTRINQ8IVI9 506 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 HELQQ8TDG4 1101 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 IGDCC4Q8TDY8 1250 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 SNX29Q8TEQ0 813 aa2.8□□□□□ -1.96
PRPF39-205ENST00000554081 SECISBP2LQ93073 1101 aaKnown RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 UHRF1Q96T88 793 aaPredicted RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 LSG1Q9H089 658 aaKnown RBP2.8□□□□□ -1.96
PRPF39-205ENST00000554081 GPRC5CQ9NQ84 441 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms