RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ATP1A1P05023 1023 aaKnown RBP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 CALB1P05937 261 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 PFKFB1P16118 471 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 COPB1P53618 953 aaKnown RBP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 TUBA4AP68366 448 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 ANKDD1AQ495B1 522 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 IGSF11Q5DX21 431 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 C1orf146Q5VVC0 180 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 EMBQ6PCB8 327 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 C2CD5Q86YS7 1000 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 KIFC2Q96AC6 838 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 IFIH1Q9BYX4 1025 aaKnown RBP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 GRIP2Q9C0E4 1043 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 SYNDIG1Q9H7V2 258 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 TCP11X1B4DZS4 312 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 EPN2O95208 641 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 OCA2Q04671 838 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 SSRP1Q08945 709 aaKnown RBP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 RSBN1Q5VWQ0 802 aaPredicted RBP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 SFR1Q86XK3 245 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 SMYD1Q8NB12 490 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 ZFAND2BQ8WV99 257 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 FERMT2Q96AC1 680 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 AGBL1Q96MI9 1066 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 SYT15Q9BQS2 421 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 ADNPQ9H2P0 1102 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 CCDC177Q9NQR7 707 aaPredicted RBP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 KLF15Q9UIH9 416 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 ASMTLO95671 621 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 PACS1Q6VY07 963 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 VSTM4Q8IW00 320 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 CNOT10Q9H9A5 744 aaKnown RBP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 HAO1Q9UJM8 370 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 STX8Q9UNK0 236 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 LRCH1Q9Y2L9 728 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 CFTRP13569 1480 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 ATP6V1C1P21283 382 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 SERPINB1P30740 379 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 PTDSS1P48651 473 aaKnown RBP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 C21orf59P57076 290 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 DSG1Q02413 1049 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 EHHADHQ08426 723 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 MKRN4PQ13434 485 aaPredicted RBP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 RAPGEF1Q13905 1077 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 ICA1LQ8NDH6 482 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 KIF21AQ7Z4S6 1674 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 GNPATO15228 680 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 ARFIP2P53365 341 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 YWHAGP61981 247 aaKnown RBP eCLIP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 DR1Q01658 176 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 RNASELQ05823 741 aaKnown RBP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 HP1BP3Q5SSJ5 553 aaPredicted RBP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 SNX30Q5VWJ9 437 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 IYDQ6PHW0 289 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 KDM7AQ6ZMT4 941 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 TMEM237Q96Q45 408 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 XPO6Q96QU8 1125 aaKnown RBP9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 AZI2Q9H6S1 392 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 KCNH3Q9ULD8 1083 aa9.64□□□□□ -0.87
GTF2A1-203ENST00000553612 KRT36O76013 467 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 GYS1P13807 737 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 METAP2P50579 478 aaKnown RBP eCLIP9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 SNX16P57768 344 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 PTH1RQ03431 593 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 VWA3BQ502W6 1294 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 LRRC34Q8IZ02 419 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 RUNDC3BQ96NL0 473 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 NSD3Q9BZ95 1437 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 A8MX80 341 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 IDH1O75874 414 aaKnown RBP9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 DLGAP3O95886 979 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 NDUFA5Q16718 116 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 ALKBH2Q6NS38 261 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 NPLOC4Q8TAT6 608 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 DHTKD1Q96HY7 919 aaPredicted RBP9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 TOR3AQ9H497 397 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 PCDHA7Q9UN72 937 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 SLC5A1P13866 664 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 CTNNA2P26232 953 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 MAPK10P53779 464 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 CRELD2Q6UXH1 353 aaPredicted RBP9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 DHX32Q7L7V1 743 aaKnown RBP9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 ASB12Q8WXK4 309 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 MCRS1Q96EZ8 462 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 EHD1Q9H4M9 534 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 DCTPP1Q9H773 170 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 PRKAG2Q9UGJ0 569 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 SERTAD1Q9UHV2 236 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 TRPC5Q9UL62 973 aaPredicted RBP9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 STRIP2Q9ULQ0 834 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 GAS7O60861 476 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 ARHGEF6Q15052 776 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 MRPL1Q9BYD6 325 aaKnown RBP9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 CBFA2T3O75081 653 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 MAGEA1P43355 309 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 FNTAP49354 379 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 PERM1Q5SV97 790 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 UNC5CLQ8IV45 518 aa9.63□□□□□ -0.87
GTF2A1-203ENST00000553612 CCDC103Q8IW40 242 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms