RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 SFR1Q86XK3 245 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 CEP63Q96MT8 703 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 ASIC3Q9UHC3 531 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 MYH2Q9UKX2 1941 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 PALM3A6NDB9 673 aaPredicted RBP12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 NOL4O94818 638 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 FAM13AO94988 1023 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 GCFC2P16383 781 aaKnown RBP12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 AGBL2Q5U5Z8 902 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 TMC3Q7Z5M5 1100 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 ERMNQ8TAM6 284 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 WDR66Q8TBY9 1149 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 CUL5Q93034 780 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 SPDL1Q96EA4 605 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 RTCBQ9Y3I0 505 aaKnown RBP12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 A0A1W2PRG0 241 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 F8VZ95 297 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 DIAPH2O60879 1101 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 RASSF9O75901 435 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 SHBGP04278 402 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 RASA1P20936 1047 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 EIF3BP55884 814 aaKnown RBP12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 IFI35P80217 286 aaPredicted RBP12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 DDB1Q16531 1140 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 SBK1Q52WX2 424 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 SEL1L2Q5TEA6 688 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 DPP8Q6V1X1 898 aaPredicted RBP12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 TAOK1Q7L7X3 1001 aa12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 ZNF572Q7Z3I7 529 aaPredicted RBP12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 STMN4Q9H169 189 aaPredicted RBP12.57□□□□□ -0.4
PPFIA2-227ENST00000552948 CAMTA2O94983 1202 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 SLC35G1Q2M3R5 365 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 GRIPAP1Q4V328 841 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 VSIG1Q86XK7 387 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 MYCT1Q8N699 235 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 DAGLBQ8NCG7 672 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 FBXO25Q8TCJ0 367 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 MIEF2Q96C03 454 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 SLITRK6Q9H5Y7 841 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 RGPD5Q99666 1765 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 C6orf229H3BNL8 230 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 LCA5LO95447 670 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 PLCG2P16885 1265 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 GJC1P36383 396 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 ATP11AP98196 1134 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 SNX1Q13596 522 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 ASTE1Q2TB18 679 aaPredicted RBP12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 ACCSLQ4AC99 568 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 TATDN2Q93075 761 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 HOMER3Q9NSC5 361 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 TRIP13Q15645 432 aaPredicted RBP12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 C10orf76Q5T2E6 689 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 TRIM59Q8IWR1 403 aa12.56□□□□□ -0.4
PPFIA2-227ENST00000552948 NEFHP12036 1026 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 STX2P32856 288 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 BYSLQ13895 437 aaKnown RBP12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 USH1GQ495M9 461 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 TTBK2Q6IQ55 1244 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 TRPM8Q7Z2W7 1104 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 SLC35G2Q8TBE7 412 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 SPZ1Q9BXG8 430 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 MCM8Q9UJA3 840 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 KDM3AQ9Y4C1 1321 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 ATP6V1G2O95670 118 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 PCK1P35558 622 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 ZNF746Q6NUN9 644 aaPredicted RBP12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 HS2ST1Q7LGA3 356 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 FBXO33Q7Z6M2 555 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 UBL4BQ8N7F7 174 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 EPS8L3Q8TE67 593 aaKnown RBP12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 SYN2Q92777 582 aaPredicted RBP12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 IFT74Q96LB3 600 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 MYH13Q9UKX3 1938 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 SUN1O94901 812 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 KCNJ1P48048 391 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 ECM1Q16610 540 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 ACTRT1Q8TDG2 376 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 SCFD1Q8WVM8 642 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 CALR3Q96L12 384 aaKnown RBP12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 ECT2Q9H8V3 914 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 FGFR1OP2Q9NVK5 253 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 MTUS1Q9ULD2 1270 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 NR2E1Q9Y466 385 aa12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 MARF1Q9Y4F3 1742 aaKnown RBP12.55□□□□□ -0.4
PPFIA2-227ENST00000552948 TCP11X1B4DZS4 312 aa12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 ANP32DO95626 131 aa12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 FERP16591 822 aa12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 CASP4P49662 377 aa12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 SNAP25P60880 206 aa12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 ELF3P78545 371 aaPredicted RBP12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 NAIF1Q69YI7 327 aaPredicted RBP12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 FAM47EQ6ZV65 393 aa12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 INTS8Q75QN2 995 aaKnown RBP12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 BHMT2Q9H2M3 363 aa12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 SEMA4AQ9H3S1 761 aa12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 SLAIN2Q9P270 581 aa12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 SLC12A6Q9UHW9 1150 aa12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 LMTK3Q96Q04 1460 aa12.54□□□□□ -0.4
PPFIA2-227ENST00000552948 AADACL2Q6P093 401 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms