RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 TMEM266Q2M3C6 531 aa10.24□□□□□ -0.77
CCDC59-207ENST00000552606 ANO5Q75V66 913 aa10.24□□□□□ -0.77
CCDC59-207ENST00000552606 C4orf19Q8IY42 314 aa10.24□□□□□ -0.77
CCDC59-207ENST00000552606 TRAPPC12Q8WVT3 735 aa10.24□□□□□ -0.77
CCDC59-207ENST00000552606 FAM212AQ96EL1 285 aa10.24□□□□□ -0.77
CCDC59-207ENST00000552606 MMTAG2Q9BU76 263 aaKnown RBP10.24□□□□□ -0.77
CCDC59-207ENST00000552606 TUBE1Q9UJT0 475 aa10.24□□□□□ -0.77
CCDC59-207ENST00000552606 FBXO2Q9UK22 296 aaPredicted RBP10.24□□□□□ -0.77
CCDC59-207ENST00000552606 CEP131Q9UPN4 1083 aa10.24□□□□□ -0.77
CCDC59-207ENST00000552606 UMODL1Q5DID0 1318 aa10.24□□□□□ -0.77
CCDC59-207ENST00000552606 VWA3AA6NCI4 1184 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 SLITRK3O94933 977 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 YEATS4O95619 227 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 RPA1P27694 616 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 PTK7Q13308 1070 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 CTTNQ14247 550 aaKnown RBP10.23□□□□□ -0.77
CCDC59-207ENST00000552606 PDIA5Q14554 519 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 SLC39A14Q15043 492 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 ECM1Q16610 540 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 XKR3Q5GH77 459 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 HAUS3Q68CZ6 603 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 TRAF7Q6Q0C0 670 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 DTHD1Q6ZMT9 781 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 RUFY4Q6ZNE9 571 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 LINC01465Q8N7H1 131 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 LINC00301Q8NCQ3 95 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 DPF3Q92784 378 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 ZBTB10Q96DT7 871 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 CHAMP1Q96JM3 812 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 IPO9Q96P70 1041 aaKnown RBP10.23□□□□□ -0.77
CCDC59-207ENST00000552606 POLR3CQ9BUI4 534 aaPredicted RBP10.23□□□□□ -0.77
CCDC59-207ENST00000552606 NIFKQ9BYG3 293 aaKnown RBP10.23□□□□□ -0.77
CCDC59-207ENST00000552606 WNT8AQ9H1J5 351 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 TUFT1Q9NNX1 390 aa10.23□□□□□ -0.77
CCDC59-207ENST00000552606 ZMYND8Q9ULU4 1186 aaPredicted RBP10.23□□□□□ -0.77
CCDC59-207ENST00000552606 RRN3P2A6NIE6 340 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 GNAT1P11488 350 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 SYN1P17600 705 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 MUTP22033 750 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 CEBPZQ03701 1054 aaKnown RBP10.22□□□□□ -0.77
CCDC59-207ENST00000552606 DNM1Q05193 864 aaKnown RBP10.22□□□□□ -0.77
CCDC59-207ENST00000552606 ZNF484Q5JVG2 852 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 HYIQ5T013 277 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 PLA2G4FQ68DD2 849 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 ATL3Q6DD88 541 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 MTHFD1LQ6UB35 978 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 RPAINQ86UA6 219 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 CATSPER3Q86XQ3 398 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 CKAP2LQ8IYA6 745 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 ERMNQ8TAM6 284 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 CAGE1Q8TC20 777 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 SNX29Q8TEQ0 813 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 VWCEQ96DN2 955 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 ZNF396Q96N95 335 aaPredicted RBP10.22□□□□□ -0.77
CCDC59-207ENST00000552606 RAB34Q9BZG1 259 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 HIPK3Q9H422 1215 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 ZSWIM4Q9H7M6 989 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 PRDM5Q9NQX1 630 aaPredicted RBP10.22□□□□□ -0.77
CCDC59-207ENST00000552606 TMEM39AQ9NV64 488 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 LRWD1Q9UFC0 647 aa10.22□□□□□ -0.77
CCDC59-207ENST00000552606 SEPT9Q9UHD8 586 aaPredicted RBP10.22□□□□□ -0.77
CCDC59-207ENST00000552606 KIAA1671Q9BY89 1806 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 IGKV6-21A0A0C4DH24 114 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 H0YGN5 161 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 ZBTB39O15060 712 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 DKC1O60832 514 aaKnown RBP eCLIP10.21□□□□□ -0.77
CCDC59-207ENST00000552606 CAND2O75155 1236 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 PPP6R2O75170 966 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 TIMP1P01033 207 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 CKBP12277 381 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 MARCKSP29966 332 aaPredicted RBP10.21□□□□□ -0.77
CCDC59-207ENST00000552606 CDC25AP30304 524 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 YWHABP31946 246 aaKnown RBP10.21□□□□□ -0.77
CCDC59-207ENST00000552606 LONP1P36776 959 aaKnown RBP10.21□□□□□ -0.77
CCDC59-207ENST00000552606 RARRES1P49788 294 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 EMP3P54852 163 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 IGBP1P78318 339 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 NUCB2P80303 420 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 MGAT3Q09327 533 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 TMEM119Q4V9L6 283 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 TAF2Q6P1X5 1199 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 LRRC15Q8TF66 581 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 AK8Q96MA6 479 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 PPP1R12CQ9BZL4 782 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 CYP26B1Q9NR63 512 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 NOD1Q9Y239 953 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 PCDHA2Q9Y5H9 948 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 SRPRBQ9Y5M8 271 aaKnown RBP10.21□□□□□ -0.77
CCDC59-207ENST00000552606 NR2E3Q9Y5X4 410 aa10.21□□□□□ -0.77
CCDC59-207ENST00000552606 KDM3AQ9Y4C1 1321 aa10.21□□□□□ -0.78
CCDC59-207ENST00000552606 SMIM35A0A1B0GVV1 85 aa10.2□□□□□ -0.78
CCDC59-207ENST00000552606 RBAK-RBAKDNI3L0D1 243 aa10.2□□□□□ -0.78
CCDC59-207ENST00000552606 SPTLC2O15270 562 aa10.2□□□□□ -0.78
CCDC59-207ENST00000552606 SLC26A4O43511 780 aa10.2□□□□□ -0.78
CCDC59-207ENST00000552606 KLRC1P26715 233 aa10.2□□□□□ -0.78
CCDC59-207ENST00000552606 CYP2C18P33260 490 aa10.2□□□□□ -0.78
CCDC59-207ENST00000552606 CCT6AP40227 531 aaKnown RBP10.2□□□□□ -0.78
CCDC59-207ENST00000552606 MAGEA10P43363 369 aaPredicted RBP10.2□□□□□ -0.78
CCDC59-207ENST00000552606 NPEPPSP55786 919 aa10.2□□□□□ -0.78
CCDC59-207ENST00000552606 GRB10Q13322 594 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms