RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 GANQ9H2C0 597 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 DEF6Q9H4E7 631 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 RNF146Q9NTX7 359 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 DBR1Q9UK59 544 aaKnown RBP15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 ADAMTS5Q9UNA0 930 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 RIPK3Q9Y572 518 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 PCDHA13Q9Y5I0 950 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 PPP2R3BQ9Y5P8 575 aa15.41■□□□□ 0.06
RAB3IP-216ENST00000552199 AKR1B10O60218 316 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 HIP1RO75146 1068 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 LYPLA2O95372 231 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 XRCC5P13010 732 aaKnown RBP15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 CASP4P49662 377 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 OAZ1P54368 228 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 HMGCS2P54868 508 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 KIF5AQ12840 1032 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 MAPK7Q13164 816 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 ODR4Q5SWX8 454 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 TEX35Q5T0J7 233 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 ARHGEF16Q5VV41 709 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 XRRA1Q6P2D8 792 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 PADI6Q6TGC4 694 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 GPR161Q8N6U8 529 aaKnown RBP15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 RABGGTAQ92696 567 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 GGA3Q9NZ52 723 aa15.4■□□□□ 0.06
RAB3IP-216ENST00000552199 DICER1Q9UPY3 1922 aaKnown RBP15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 USO1O60763 962 aaKnown RBP15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 QARSP47897 775 aaKnown RBP15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 CHMP4BP1P59074 171 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 APBA1Q02410 837 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 BAATQ14032 418 aaPredicted RBP15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 WHAMMP3Q1A5X7 153 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 DPY19L2P1Q6NXN4 242 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 DAW1Q8N136 415 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 GPC2Q8N158 579 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 BORCS6Q96GS4 357 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 IFIH1Q9BYX4 1025 aaKnown RBP15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 PLCB1Q9NQ66 1216 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 MYO6Q9UM54 1294 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 SAMM50Q9Y512 469 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 PCDHB13Q9Y5F0 798 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 DUSP10Q9Y6W6 482 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 TLR2O60603 784 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 SERPING1P05155 500 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 HIRAP54198 1017 aaPredicted RBP15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 COG2Q14746 738 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 SLC9C1Q4G0N8 1177 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 NOL9Q5SY16 702 aaKnown RBP15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 STRA6Q9BX79 667 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 IKZF4Q9H2S9 585 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 AIPL1Q9NZN9 384 aa15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 PUF60Q9UHX1 559 aaKnown RBP15.39■□□□□ 0.05
RAB3IP-216ENST00000552199 ATP9AO75110 1047 aa15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 PSMC2P35998 433 aaKnown RBP15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 DCAF17Q5H9S7 520 aaPredicted RBP15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 SNRNP48Q6IEG0 339 aaKnown RBP15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 CATSPERGQ6ZRH7 1159 aa15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 TRAPPC11Q7Z392 1133 aa15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 VSIG10LQ86VR7 867 aa15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 GPIHBP1Q8IV16 184 aa15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 KSR1Q8IVT5 923 aa15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 SLC35C1Q96A29 364 aa15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 MKNK1Q9BUB5 465 aa15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 DMAC2Q9NW81 257 aa15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 DDX41Q9UJV9 622 aaKnown RBP15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 ZNF214Q9UL59 606 aaPredicted RBP15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 SSC5DA1L4H1 1573 aa15.38■□□□□ 0.05
RAB3IP-216ENST00000552199 PPP1R37O75864 691 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 SLC9A1P19634 815 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 CCND2P30279 289 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 MAGEA1P43355 309 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 RARRES1P49788 294 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 CLCN6P51797 869 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 JAK3P52333 1124 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 TUBB4BP68371 445 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 EXOC3L4Q17RC7 722 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 SUPT20HL1Q3ZLR7 823 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 PAPD7Q5XG87 772 aaKnown RBP15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 HS2ST1Q7LGA3 356 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 FAM186BQ8IYM0 893 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 SECISBP2LQ93073 1101 aaKnown RBP15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 GBP3Q9H0R5 595 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 EPC1Q9H2F5 836 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 ARGLU1Q9NWB6 273 aaPredicted RBP15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 TMOD4Q9NZQ9 345 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 POLR2AP24928 1970 aaKnown RBP15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 RBAK-RBAKDNI3L0D1 243 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 ATP2A1O14983 1001 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 PJA2O43164 708 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 ATP1A1P05023 1023 aaKnown RBP15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 MAPTP10636 758 aaKnown RBP15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 ACTN1P12814 892 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 LMNB1P20700 586 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 PON1P27169 355 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 SFNP31947 248 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 KRT76Q01546 638 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 RAPGEF1Q13905 1077 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 TMEM132BQ14DG7 1078 aa15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 TDRD12Q587J7 1177 aaKnown RBP15.37■□□□□ 0.05
RAB3IP-216ENST00000552199 KLHDC7AQ5VTJ3 777 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms