RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 MTA3Q9BTC8 594 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 AZI2Q9H6S1 392 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 ELAC1Q9H777 363 aaKnown RBP15.5■□□□□ 0.07
CDX2-202ENST00000548877 PSTPIP2Q9H939 334 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 NGRNQ9NPE2 291 aaKnown RBP15.5■□□□□ 0.07
CDX2-202ENST00000548877 TYW1Q9NV66 732 aaKnown RBP15.5■□□□□ 0.07
CDX2-202ENST00000548877 SLC9A2Q9UBY0 812 aa15.5■□□□□ 0.07
CDX2-202ENST00000548877 PRR23AA6NEV1 266 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 PDGFBP01127 241 aaPredicted RBP15.49■□□□□ 0.07
CDX2-202ENST00000548877 LAG3P18627 525 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 KIF5BP33176 963 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 TECP42680 631 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 GNAQP50148 359 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 STAT5BP51692 787 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 ANTXR2P58335 489 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 FAM102BQ5T8I3 360 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 MTHFD1LQ6UB35 978 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 ASCL5Q7RTU5 278 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 TEX2Q8IWB9 1127 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 THNSL1Q8IYQ7 743 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 KREMEN2Q8NCW0 462 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 TRAPPC12Q8WVT3 735 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 PIBF1Q8WXW3 757 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 ADAM2Q99965 735 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 TMEM161AQ9NX61 479 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 TMEM260Q9NX78 707 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 SEC63Q9UGP8 760 aaKnown RBP15.49■□□□□ 0.07
CDX2-202ENST00000548877 SORCS3Q9UPU3 1222 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 TRPC6Q9Y210 931 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 NOC2LQ9Y3T9 749 aaKnown RBP15.49■□□□□ 0.07
CDX2-202ENST00000548877 NR2E1Q9Y466 385 aa15.49■□□□□ 0.07
CDX2-202ENST00000548877 DMDP11532 3685 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 IGKV6D-21A0A0A0MT36 114 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 TBKBP1A7MCY6 615 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 E7EWF7 191 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 RPS6KA5O75582 802 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 ACTR2P61160 394 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 NFX1Q12986 1120 aaKnown RBP15.48■□□□□ 0.07
CDX2-202ENST00000548877 TMEM266Q2M3C6 531 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 SPOUT1Q5T280 376 aaKnown RBP15.48■□□□□ 0.07
CDX2-202ENST00000548877 ERMP1Q7Z2K6 904 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 RALYLQ86SE5 291 aaKnown RBP15.48■□□□□ 0.07
CDX2-202ENST00000548877 KIAA0319LQ8IZA0 1049 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 ZNF654Q8IZM8 581 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 CTCFLQ8NI51 663 aaPredicted RBP15.48■□□□□ 0.07
CDX2-202ENST00000548877 NECTIN4Q96NY8 510 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 RWDD1Q9H446 243 aaPredicted RBP15.48■□□□□ 0.07
CDX2-202ENST00000548877 KCNH7Q9NS40 1196 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 PUF60Q9UHX1 559 aaKnown RBP15.48■□□□□ 0.07
CDX2-202ENST00000548877 PCDHA6Q9UN73 950 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 ST3GAL5Q9UNP4 418 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 PCDHA8Q9Y5H6 950 aa15.48■□□□□ 0.07
CDX2-202ENST00000548877 GPR182O15218 404 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 KLRC1P26715 233 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 MTMR3Q13615 1198 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 DSC3Q14574 896 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 B4GALNT3Q6L9W6 998 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 MB21D2Q8IYB1 491 aaPredicted RBP15.47■□□□□ 0.07
CDX2-202ENST00000548877 SRBD1Q8N5C6 995 aaKnown RBP15.47■□□□□ 0.07
CDX2-202ENST00000548877 TMEM105Q8N8V8 129 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 TMEM40Q8WWA1 233 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 CASP10Q92851 521 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 MXRA8Q9BRK3 442 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 CDHR5Q9HBB8 845 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 LY9Q9HBG7 655 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 HCSTQ9UBK5 93 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 TAF6LQ9Y6J9 622 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 COL1A2P08123 1366 aa15.47■□□□□ 0.07
CDX2-202ENST00000548877 DENND3A2RUS2 1198 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 SPDYE3A6NKU9 549 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 HIDE1A8MVS5 230 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 HBP1O60381 514 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 BRD1O95696 1058 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 PDE4AP27815 886 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 PTH1RQ03431 593 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 ITIH3Q06033 890 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 TPRNQ4KMQ1 711 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 TCF25Q9BQ70 676 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 SDF4Q9BRK5 362 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 TMEM117Q9H0C3 514 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 ADAM7Q9H2U9 754 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 ATP6V0A4Q9HBG4 840 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 PKD2L1Q9P0L9 805 aa15.46■□□□□ 0.07
CDX2-202ENST00000548877 PLEKHA8P1O95397 391 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 PPM1AP35813 382 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 CLCN5P51795 746 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 CRYBB1P53674 252 aaPredicted RBP15.45■□□□□ 0.06
CDX2-202ENST00000548877 APOBRQ0VD83 1088 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 UBE2SQ16763 222 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 PLPP4Q5VZY2 271 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 ASTLQ6HA08 431 aaPredicted RBP15.45■□□□□ 0.06
CDX2-202ENST00000548877 KCNT2Q6UVM3 1135 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 LRRC55Q6ZSA7 311 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 ZBTB33Q86T24 672 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 ZDHHC14Q8IZN3 488 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 EXOC6Q8TAG9 804 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 CASD1Q96PB1 797 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 POMKQ9H5K3 350 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 RNF19AQ9NV58 838 aa15.45■□□□□ 0.06
CDX2-202ENST00000548877 GVINP1Q7Z2Y8 2422 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms