RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 MCOLN1Q9GZU1 580 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 WNT8AQ9H1J5 351 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 RBPJLQ9UBG7 517 aa5.51□□□□□ -1.53
PTCH1-216ENST00000548379 TEX51A0A1B0GUA7 166 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 GOLGA8AA7E2F4 631 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 GOLGA8BA8MQT2 603 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 TSPAN6O43657 245 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 PCDHGA12O60330 932 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 H2AFYO75367 372 aaKnown RBP5.5□□□□□ -1.53
PTCH1-216ENST00000548379 CFBP00751 764 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 CDR1P51861 262 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 SCAND1P57086 179 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 PFKPQ01813 784 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 PCBP2Q15366 365 aaKnown RBP eCLIP5.5□□□□□ -1.53
PTCH1-216ENST00000548379 TARBP2Q15633 366 aaKnown RBP5.5□□□□□ -1.53
PTCH1-216ENST00000548379 PTPN21Q16825 1174 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 TMEM240Q5SV17 173 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 PRR23BQ6ZRT6 265 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 ESPNLQ6ZVH7 1005 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 KCNK18Q7Z418 384 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 ZC3H18Q86VM9 953 aaKnown RBP5.5□□□□□ -1.53
PTCH1-216ENST00000548379 FMNL3Q8IVF7 1028 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 Q8N3U1 123 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 POFUT1Q9H488 388 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 SLC39A2Q9NP94 309 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 INCENPQ9NQS7 918 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 CCM2LQ9NUG4 571 aaPredicted RBP5.5□□□□□ -1.53
PTCH1-216ENST00000548379 GALNT8Q9NY28 637 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 FAM53CQ9NYF3 392 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 TMPRSS11EQ9UL52 423 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 PCDHGA9Q9Y5G4 932 aaKnown RBP5.5□□□□□ -1.53
PTCH1-216ENST00000548379 PCDHGA8Q9Y5G5 932 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 PCDHGA7Q9Y5G6 932 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 PCDHGA6Q9Y5G7 932 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 PCDHGA3Q9Y5H0 932 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 PCDHGA2Q9Y5H1 932 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 PPP2R3BQ9Y5P8 575 aa5.5□□□□□ -1.53
PTCH1-216ENST00000548379 PRPF6O94906 941 aaKnown RBP5.49□□□□□ -1.53
PTCH1-216ENST00000548379 MT-CO1P00395 513 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 MYBL2P10244 700 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 ENPP1P22413 925 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 MC3RP41968 323 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 MTNR1BP49286 362 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 STILQ15468 1287 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 VASNQ6EMK4 673 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 KIAA1841Q6NSI8 718 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 CD300LDQ6UXZ3 194 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 NBPF11Q86T75 865 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 LYSMD2Q8IV50 215 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 SLC41A1Q8IVJ1 513 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 IGDCC3Q8IVU1 814 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 C7orf31Q8N865 590 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 HIPK4Q8NE63 616 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 MYL10Q9BUA6 226 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 BTBD2Q9BX70 525 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 RHOBTB2Q9BYZ6 727 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 EPB41L4BQ9H329 900 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 NSUN3Q9H649 340 aaKnown RBP5.49□□□□□ -1.53
PTCH1-216ENST00000548379 PCDH18Q9HCL0 1135 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 GCM1Q9NP62 436 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 DLL4Q9NR61 685 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 ZNF277Q9NRM2 450 aaPredicted RBP5.49□□□□□ -1.53
PTCH1-216ENST00000548379 UCKL1Q9NWZ5 548 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 ARHGAP28Q9P2N2 729 aa5.49□□□□□ -1.53
PTCH1-216ENST00000548379 PRSS38A1L453 326 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 SEMA7AO75326 666 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 RFPL1O75677 317 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 CYP2C8P10632 490 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 ECE1P42892 770 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 RGS3P49796 1198 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 ITGA1P56199 1179 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 SLC6A3Q01959 620 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 ROM1Q03395 351 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 ADAM9Q13443 819 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 LRRC41Q15345 812 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 SKIDA1Q1XH10 827 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 PITRM1Q5JRX3 1037 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 CCDC181Q5TID7 509 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 SLFN12LQ6IEE8 588 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 TIGD7Q6NT04 549 aaPredicted RBP5.48□□□□□ -1.53
PTCH1-216ENST00000548379 LRSAM1Q6UWE0 723 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 MPZL3Q6UWV2 235 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 LINC00482Q8N8I6 264 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 MZB1Q8WU39 189 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 SSH1Q8WYL5 1049 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 ERCC4Q92889 916 aaPredicted RBP5.48□□□□□ -1.53
PTCH1-216ENST00000548379 TUBGCP5Q96RT8 1024 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 TMEM209Q96SK2 561 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 SYT3Q9BQG1 590 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 PITHD1Q9GZP4 211 aaPredicted RBP5.48□□□□□ -1.53
PTCH1-216ENST00000548379 DCP1AQ9NPI6 582 aaPredicted RBP5.48□□□□□ -1.53
PTCH1-216ENST00000548379 AASDHPPTQ9NRN7 309 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 SIRT5Q9NXA8 310 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 ZIM2Q9NZV7 527 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 TCEAL9Q9UHQ7 104 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 DENND2AQ9ULE3 1009 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 NUMBLQ9Y6R0 609 aa5.48□□□□□ -1.53
PTCH1-216ENST00000548379 N4BP3O15049 544 aa5.47□□□□□ -1.53
PTCH1-216ENST00000548379 SCGB1D2O95969 90 aa5.47□□□□□ -1.53
PTCH1-216ENST00000548379 IL18BPO95998 194 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms