RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 C6orf222P0C671 652 aaPredicted RBP3.56□□□□□ -1.84
CEP290-204ENST00000547926 BMS1Q14692 1282 aaKnown RBP3.56□□□□□ -1.84
CEP290-204ENST00000547926 EPHA10Q5JZY3 1008 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 STYK1Q6J9G0 422 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 LARP4Q71RC2 724 aaKnown RBP eCLIP3.56□□□□□ -1.84
CEP290-204ENST00000547926 LRP10Q7Z4F1 713 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 PRIMA1Q86XR5 153 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 CDC6Q99741 560 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 ARHGAP20Q9P2F6 1191 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 ASH2LQ9UBL3 628 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 TELO2Q9Y4R8 837 aa3.56□□□□□ -1.84
CEP290-204ENST00000547926 H7BY64 318 aa3.55□□□□□ -1.84
CEP290-204ENST00000547926 LMNAP02545 664 aaKnown RBP3.55□□□□□ -1.84
CEP290-204ENST00000547926 LBX2Q6XYB7 198 aa3.55□□□□□ -1.84
CEP290-204ENST00000547926 LILRB2Q8N423 598 aa3.55□□□□□ -1.84
CEP290-204ENST00000547926 MKL1Q969V6 931 aa3.55□□□□□ -1.84
CEP290-204ENST00000547926 DRC1Q96MC2 740 aa3.55□□□□□ -1.84
CEP290-204ENST00000547926 CARD11Q9BXL7 1154 aa3.55□□□□□ -1.84
CEP290-204ENST00000547926 AGO3Q9H9G7 860 aaKnown RBP3.55□□□□□ -1.84
CEP290-204ENST00000547926 HSPBP1Q9NZL4 362 aa3.55□□□□□ -1.84
CEP290-204ENST00000547926 CDK11AQ9UQ88 783 aaPredicted RBP3.55□□□□□ -1.84
CEP290-204ENST00000547926 NR2E1Q9Y466 385 aa3.55□□□□□ -1.84
CEP290-204ENST00000547926 SOGA3Q5TF21 947 aa3.55□□□□□ -1.84
CEP290-204ENST00000547926 RSPO2Q6UXX9 243 aaPredicted RBP3.55□□□□□ -1.84
CEP290-204ENST00000547926 SGMS1Q86VZ5 419 aa3.55□□□□□ -1.84
CEP290-204ENST00000547926 KCNJ15Q99712 375 aa3.55□□□□□ -1.84
CEP290-204ENST00000547926 MLST8Q9BVC4 326 aa3.55□□□□□ -1.84
CEP290-204ENST00000547926 COA3Q9Y2R0 106 aaPredicted RBP3.55□□□□□ -1.84
CEP290-204ENST00000547926 MRPS23Q9Y3D9 190 aaKnown RBP3.55□□□□□ -1.84
CEP290-204ENST00000547926 DGKIO75912 1065 aa3.54□□□□□ -1.84
CEP290-204ENST00000547926 COL6A2P12110 1019 aa3.54□□□□□ -1.84
CEP290-204ENST00000547926 GPR85P60893 370 aa3.54□□□□□ -1.84
CEP290-204ENST00000547926 TOP3AQ13472 1001 aaPredicted RBP3.54□□□□□ -1.84
CEP290-204ENST00000547926 CD276Q5ZPR3 534 aa3.54□□□□□ -1.84
CEP290-204ENST00000547926 MRGPREQ86SM8 312 aa3.54□□□□□ -1.84
CEP290-204ENST00000547926 REXO1L1PQ8IX06 675 aa3.54□□□□□ -1.84
CEP290-204ENST00000547926 PIP4K2CQ8TBX8 421 aa3.54□□□□□ -1.84
CEP290-204ENST00000547926 DHRS4Q9BTZ2 278 aa3.54□□□□□ -1.84
CEP290-204ENST00000547926 EPB41L1Q9H4G0 881 aa3.54□□□□□ -1.84
CEP290-204ENST00000547926 ZSWIM4Q9H7M6 989 aa3.54□□□□□ -1.84
CEP290-204ENST00000547926 SYNPO2LQ9H987 977 aa3.54□□□□□ -1.84
CEP290-204ENST00000547926 KANSL2Q9H9L4 492 aa3.54□□□□□ -1.84
CEP290-204ENST00000547926 GRK2P25098 689 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 GRK3P35626 688 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 CLK3P49761 638 aaKnown RBP3.53□□□□□ -1.84
CEP290-204ENST00000547926 SUMO1P63165 101 aaKnown RBP3.53□□□□□ -1.84
CEP290-204ENST00000547926 KIZQ2M2Z5 673 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 CCDC144BQ3MJ40 725 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 IFNL3Q8IZI9 196 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 JMYQ8N9B5 988 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 UBXN4Q92575 508 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 PTPRN2Q92932 1015 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 ZFYVE21Q9BQ24 234 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 IPPKQ9H8X2 491 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 ZNHIT2Q9UHR6 403 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 PCDHA8Q9Y5H6 950 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 KRTAP23-1A1A580 65 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 NKRFO15226 690 aaKnown RBP eCLIP3.53□□□□□ -1.84
CEP290-204ENST00000547926 SOD2P04179 222 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 LONRF2Q1L5Z9 754 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 ZNF362Q5T0B9 420 aaPredicted RBP3.53□□□□□ -1.84
CEP290-204ENST00000547926 Q6ZRM9 215 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 PUM2Q8TB72 1066 aaKnown RBP eCLIP3.53□□□□□ -1.84
CEP290-204ENST00000547926 PIF1Q9H611 641 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 NRDE2Q9H7Z3 1164 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 GIT1Q9Y2X7 761 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 PCDHA9Q9Y5H5 950 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 PTCH2Q9Y6C5 1203 aa3.53□□□□□ -1.84
CEP290-204ENST00000547926 POLD1P28340 1107 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 SCNN1GP51170 649 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 GRM7Q14831 915 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 ZNF568Q3ZCX4 644 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 MAMDC2Q7Z304 686 aaPredicted RBP3.52□□□□□ -1.85
CEP290-204ENST00000547926 IPO9Q96P70 1041 aaKnown RBP3.52□□□□□ -1.85
CEP290-204ENST00000547926 SLC52A2Q9HAB3 445 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 SLC6A20Q9NP91 592 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 SLC39A2Q9NP94 309 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 PARPBPQ9NWS1 579 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 TCRBV5S4A2TA0A5A2 114 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 CAPN14A8MX76 684 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 CHGBP05060 677 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 GABREP78334 506 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 GUCY1A3Q02108 690 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 C2orf27AQ580R0 203 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 OTOP3Q7RTS5 596 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 MTDHQ86UE4 582 aaKnown RBP3.52□□□□□ -1.85
CEP290-204ENST00000547926 SLC7A14Q8TBB6 771 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 THAP3Q8WTV1 239 aaPredicted RBP3.52□□□□□ -1.85
CEP290-204ENST00000547926 R3HDMLQ9H3Y0 253 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 SMOC1Q9H4F8 434 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 NDOR1Q9UHB4 597 aa3.52□□□□□ -1.85
CEP290-204ENST00000547926 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.51□□□□□ -1.85
CEP290-204ENST00000547926 TMEM191CA6NGB0 347 aa3.51□□□□□ -1.85
CEP290-204ENST00000547926 AQP7O14520 342 aa3.51□□□□□ -1.85
CEP290-204ENST00000547926 FAM20BO75063 409 aa3.51□□□□□ -1.85
CEP290-204ENST00000547926 CRTAMO95727 393 aa3.51□□□□□ -1.85
CEP290-204ENST00000547926 GNAT1P11488 350 aa3.51□□□□□ -1.85
CEP290-204ENST00000547926 RBM10P98175 930 aaKnown RBP3.51□□□□□ -1.85
CEP290-204ENST00000547926 SQSTM1Q13501 440 aa3.51□□□□□ -1.85
CEP290-204ENST00000547926 ACAP1Q15027 740 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms