RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 YWHABP31946 246 aaKnown RBP9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 ZNF543Q08ER8 600 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 KYAT1Q16773 422 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 HS1BP3Q53T59 392 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 SFR1Q86XK3 245 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 GPT2Q8TD30 523 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 NYAP2Q9P242 653 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 POTEFA5A3E0 1075 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 CCDC160A6NGH7 325 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 EIF3CLB5ME19 914 aaKnown RBP9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 POTEIP0CG38 1075 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 RGS2P41220 211 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 ARL13BQ3SXY8 428 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 POTEGQ6S5H5 508 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 POTEEQ6S8J3 1075 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 ADAT2Q7Z6V5 191 aaKnown RBP9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 FBF1Q8TES7 1133 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 EIF3CQ99613 913 aaKnown RBP9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 CACYBPQ9HB71 228 aaKnown RBP9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 GBA2Q9HCG7 927 aaPredicted RBP9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 VPS18Q9P253 973 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 PCDHA5Q9Y5H7 936 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 PPP2R3BQ9Y5P8 575 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 PXDNQ92626 1479 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 SLC4A1P02730 911 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 KRT1P04264 644 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 ARL4AP40617 200 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 DENND2CQ68D51 928 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 UNC13DQ70J99 1090 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 TAB3Q8N5C8 712 aaPredicted RBP9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 FAM133AQ8N9E0 248 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 CHST13Q8NET6 341 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 GINM1Q9NU53 330 aa9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 SUCLA2Q9P2R7 463 aaPredicted RBP9.78□□□□□ -0.84
MTHFD1-202ENST00000545908 E9PMD0 336 aa9.77□□□□□ -0.84
MTHFD1-202ENST00000545908 POLRMTO00411 1230 aaKnown RBP9.77□□□□□ -0.84
MTHFD1-202ENST00000545908 H2AFZP0C0S5 128 aa9.77□□□□□ -0.84
MTHFD1-202ENST00000545908 GTF2F1P35269 517 aaKnown RBP eCLIP9.77□□□□□ -0.84
MTHFD1-202ENST00000545908 MMP14P50281 582 aa9.77□□□□□ -0.84
MTHFD1-202ENST00000545908 H2AFVQ71UI9 128 aa9.77□□□□□ -0.84
MTHFD1-202ENST00000545908 SCYL1Q96KG9 808 aa9.77□□□□□ -0.84
MTHFD1-202ENST00000545908 TRIM56Q9BRZ2 755 aaKnown RBP9.77□□□□□ -0.84
MTHFD1-202ENST00000545908 SAMD15Q9P1V8 674 aa9.77□□□□□ -0.84
MTHFD1-202ENST00000545908 TUBBP07437 444 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 ZNF18P17022 549 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 LRRC63Q05C16 580 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 SMARCAD1Q9H4L7 1026 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 PIN4Q9Y237 131 aaKnown RBP9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 HYOU1Q9Y4L1 999 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 ATF2P15336 505 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 SRBD1Q8N5C6 995 aaKnown RBP9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 OPTNQ96CV9 577 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 CCDC68Q9H2F9 335 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 MYO1FO00160 1098 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 S100BP04271 92 aaPredicted RBP9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 STAT5BP51692 787 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 COASYQ13057 564 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 RNF219Q5W0B1 726 aaPredicted RBP9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 RNF180Q86T96 592 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 CLEC10AQ8IUN9 316 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 TEX2Q8IWB9 1127 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 ANKRD13CQ8N6S4 541 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 PRPSAP2O60256 369 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 ZWINTO95229 277 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 CTSHP09668 335 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 SRGNP10124 158 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 PAK2Q13177 524 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 CPLX4Q7Z7G2 160 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 CCNYQ8ND76 341 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 HSPH1Q92598 858 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 SEPT8Q92599 483 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 ATP2A3Q93084 1043 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 MRPL47Q9HD33 250 aaKnown RBP9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 TUFT1Q9NNX1 390 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 LMCD1Q9NZU5 365 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 PRR12Q9ULL5 1215 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 PCDHB7Q9Y5E2 793 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 PCDHA10Q9Y5I2 948 aa9.77□□□□□ -0.85
MTHFD1-202ENST00000545908 KIF28PB7ZC32 967 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 TDP2O95551 362 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 HPDP32754 393 aaPredicted RBP9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 HDLBPQ00341 1268 aaKnown RBP9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 RBL2Q08999 1139 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 DGKDQ16760 1214 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 INTS8Q75QN2 995 aaKnown RBP9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 YAF2Q8IY57 180 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 MTA3Q9BTC8 594 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 ARHGAP23Q9P227 1491 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 UPP2O95045 317 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 RWDD4Q6NW29 188 aaKnown RBP9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 DESI2Q9BSY9 194 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 VIMP08670 466 aaKnown RBP9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 MUM1L1Q5H9M0 696 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 HHATQ5VTY9 493 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 ZNF449Q6P9G9 518 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 FAM76AQ8TAV0 307 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 KIF12Q96FN5 646 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 UBN1Q9NPG3 1134 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 GJB4Q9NTQ9 266 aa9.76□□□□□ -0.85
MTHFD1-202ENST00000545908 MROH1Q8NDA8 1641 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms