RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 TMEM59LQ9UK28 342 aa13.64□□□□□ -0.23
PAAF1-215ENST00000544909 DIS3Q9Y2L1 958 aaKnown RBP13.64□□□□□ -0.23
PAAF1-215ENST00000544909 PALMO75781 387 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 AKAP3O75969 853 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 FAM13AO94988 1023 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 KLRC1P26715 233 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 CASP5P51878 434 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 PRELPP51888 382 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 PPP2R5EQ16537 467 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 CEP55Q53EZ4 464 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 LRCH2Q5VUJ6 765 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 B3GNT9Q6UX72 402 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 FAM133AQ8N9E0 248 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 ZNF622Q969S3 477 aaKnown RBP eCLIP13.63□□□□□ -0.23
PAAF1-215ENST00000544909 LRRC1Q9BTT6 524 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 TIPINQ9BVW5 301 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 TBC1D7Q9P0N9 293 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 ADAMTS1Q9UHI8 967 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 NAGPAQ9UK23 515 aa13.63□□□□□ -0.23
PAAF1-215ENST00000544909 NPHP3-ACAD11A0A0J9YXS1 232 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 CCDC188H7C350 402 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 P4HA2O15460 535 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 GCNT3O95395 438 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 VIL1P09327 827 aaKnown RBP13.62□□□□□ -0.23
PAAF1-215ENST00000544909 NAP1L1P55209 391 aaKnown RBP13.62□□□□□ -0.23
PAAF1-215ENST00000544909 PSMC6P62333 389 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 PTK2Q05397 1052 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 SLFN11Q7Z7L1 901 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 MTMR14Q8NCE2 650 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 SLC17A8Q8NDX2 589 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 TAF4BQ92750 862 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 GJA10Q969M2 543 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 GINM1Q9NU53 330 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 DMAC2Q9NW81 257 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 DMGDHQ9UI17 866 aaKnown RBP13.62□□□□□ -0.23
PAAF1-215ENST00000544909 PCDHB13Q9Y5F0 798 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 SPDYE2BA6NHP3 402 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 TULP2O00295 520 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 MEIS1O00470 390 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 MAPK13O15264 365 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 N4BP1O75113 896 aaKnown RBP13.62□□□□□ -0.23
PAAF1-215ENST00000544909 SPDYE6P0CI01 402 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 MYBL2P10244 700 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 LMNB1P20700 586 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 STAT1P42224 750 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 MCCD1P59942 119 aaPredicted RBP13.62□□□□□ -0.23
PAAF1-215ENST00000544909 USH1GQ495M9 461 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 EMC10Q5UCC4 262 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 ALKBH5Q6P6C2 394 aaKnown RBP13.62□□□□□ -0.23
PAAF1-215ENST00000544909 FAM83AQ86UY5 434 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 CD302Q8IX05 232 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 C12orf56Q8IXR9 622 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 LRRC57Q8N9N7 239 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 USP38Q8NB14 1042 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 FAM76AQ8TAV0 307 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 RUSC1Q9BVN2 902 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 ZHX3Q9H4I2 956 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 VCPKMTQ9H867 229 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.62□□□□□ -0.23
PAAF1-215ENST00000544909 GCNT4Q9P109 453 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 FEM1BQ9UK73 627 aa13.62□□□□□ -0.23
PAAF1-215ENST00000544909 TTC7AQ9ULT0 858 aaPredicted RBP13.62□□□□□ -0.23
PAAF1-215ENST00000544909 RBBP6Q7Z6E9 1792 aaKnown RBP13.61□□□□□ -0.23
PAAF1-215ENST00000544909 AGPSO00116 658 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 PMM2O15305 246 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 TGFB1I1O43294 461 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 RAD21O60216 631 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 GAS7O60861 476 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 SLITRK3O94933 977 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 GDF11O95390 407 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 MYBP10242 640 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 HSPA1LP34931 641 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 CACNB3P54284 484 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 CUL1Q13616 776 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 RPS6KA1Q15418 735 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 STK33Q9BYT3 514 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 SIX2Q9NPC8 291 aa13.61□□□□□ -0.23
PAAF1-215ENST00000544909 RBM12Q9NTZ6 932 aaKnown RBP13.61□□□□□ -0.23
PAAF1-215ENST00000544909 SUCLA2Q9P2R7 463 aaPredicted RBP13.61□□□□□ -0.23
PAAF1-215ENST00000544909 ZMYM2Q9UBW7 1377 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 A0A1W2PRG0 241 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 FAM196BA6NMK8 535 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 KIF4AO95239 1232 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 H2AFZP0C0S5 128 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 GGCXP38435 758 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 MAP3K10Q02779 954 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 TCEAL1Q15170 157 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 H2AFVQ71UI9 128 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 ZNF720Q7Z2F6 126 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 ZNF571Q7Z3V5 609 aaPredicted RBP13.6□□□□□ -0.23
PAAF1-215ENST00000544909 FAM186BQ8IYM0 893 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 DRC1Q96MC2 740 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 RUFY1Q96T51 708 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 PSMD1Q99460 953 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.6□□□□□ -0.23
PAAF1-215ENST00000544909 STRA6Q9BX79 667 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 TDRD3Q9H7E2 651 aaKnown RBP13.6□□□□□ -0.23
PAAF1-215ENST00000544909 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
PAAF1-215ENST00000544909 ZBTB21Q9ULJ3 1066 aa13.6□□□□□ -0.23
PAAF1-215ENST00000544909 FRMD4BQ9Y2L6 1034 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms