RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 CYP3A4P08684 503 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 SLFN14P0C7P3 912 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 GCFC2P16383 781 aaKnown RBP8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 CCT6AP40227 531 aaKnown RBP8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 SEMA3FQ13275 785 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 MTMR1Q13613 665 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 Q4G0T1 1027 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 LCE2CQ5TA81 110 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 SEPT14Q6ZU15 432 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 PIGOQ8TEQ8 1089 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 MBOAT7Q96N66 472 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 MXRA8Q9BRK3 442 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 UNC45AQ9H3U1 944 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 CBX8Q9HC52 389 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 BLOC1S4Q9NUP1 217 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 MAN1B1Q9UKM7 699 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 KIAA1024Q9UPX6 916 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 PCDHB9Q9Y5E1 797 aa8.65□□□□□ -1.02
AC005840.3-201ENST00000541888 ATP2A1O14983 1001 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 GAS7O60861 476 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 AOC2O75106 756 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 CIITAP33076 1130 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 TXLNAP40222 546 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 OAZ1P54368 228 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 PTPN21Q16825 1174 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 PCNX4Q63HM2 1172 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 KLHL10Q6JEL2 608 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 RGMBQ6NW40 437 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 CATSPER3Q86XQ3 398 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 RIOX2Q8IUF8 465 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 AOPEPQ8N6M6 819 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 IQUBQ8NA54 791 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 EEF2KMTQ96G04 330 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 CDK5RAP3Q96JB5 506 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 FGD4Q96M96 766 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 USP25Q9UHP3 1055 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 GDAQ9Y2T3 454 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 SAMM50Q9Y512 469 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 MYPNQ86TC9 1320 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 UQCRHLA0A096LP55 91 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 FAM155AB1AL88 458 aaPredicted RBP8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 MAN1A2O60476 641 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 PSMD10O75832 226 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 UQCRHP07919 91 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 SPATA31C1P0DKV0 1188 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 ZNF165P49910 485 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 ALDH5A1P51649 535 aaPredicted RBP8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 STX17P56962 302 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 FKBP1BP68106 108 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 SP2Q02086 613 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 DPYDQ12882 1025 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 TRAF1Q13077 416 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 NR1H3Q13133 447 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 PABPC4Q13310 644 aaKnown RBP eCLIP8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 STX1AQ16623 288 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 UGCGQ16739 394 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 GJC2Q5T442 439 aaPredicted RBP8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 KRT79Q5XKE5 535 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 OTOP1Q7RTM1 612 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 TPH2Q8IWU9 490 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 GLIS3Q8NEA6 775 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 SMARCE1Q969G3 411 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 DYDC2Q96IM9 177 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 TIGD1Q96MW7 591 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 CCSER1Q9C0I3 900 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 TBC1D7Q9P0N9 293 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 ZKSCAN5Q9Y2L8 839 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 UBIAD1Q9Y5Z9 338 aa8.64□□□□□ -1.03
AC005840.3-201ENST00000541888 MYH11P35749 1972 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 MYMKA6NI61 221 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 CTAGE5O15320 804 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 DHX15O43143 795 aaKnown RBP8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 LETM1O95202 739 aaPredicted RBP8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 CCNE2O96020 404 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 ZBTB48P10074 688 aaPredicted RBP8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 FCER1AP12319 257 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 FBXO16Q8IX29 292 aaPredicted RBP8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 SLFN12Q8IYM2 578 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 ZNF784Q8NCA9 323 aaPredicted RBP8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 NSUN6Q8TEA1 469 aaKnown RBP8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 SLC5A5Q92911 643 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 CALML4Q96GE6 196 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 MMP19Q99542 508 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 EIF2AK1Q9BQI3 630 aaKnown RBP8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 FGFBP2Q9BYJ0 223 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 EHMT1Q9H9B1 1298 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 AGO4Q9HCK5 861 aaKnown RBP8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 CCDC39Q9UFE4 941 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 TUBE1Q9UJT0 475 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 RABGAP1Q9Y3P9 1069 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 MYH9P35579 1960 aaKnown RBP8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 FRMPD4Q14CM0 1322 aa8.63□□□□□ -1.03
AC005840.3-201ENST00000541888 ADORA2AP29274 412 aa8.62□□□□□ -1.03
AC005840.3-201ENST00000541888 CCND2P30279 289 aa8.62□□□□□ -1.03
AC005840.3-201ENST00000541888 VEGFBP49765 207 aa8.62□□□□□ -1.03
AC005840.3-201ENST00000541888 RBM10P98175 930 aaKnown RBP8.62□□□□□ -1.03
AC005840.3-201ENST00000541888 GHRHRQ02643 423 aa8.62□□□□□ -1.03
AC005840.3-201ENST00000541888 DMTNQ08495 405 aa8.62□□□□□ -1.03
AC005840.3-201ENST00000541888 TAF1CQ15572 869 aaPredicted RBP8.62□□□□□ -1.03
AC005840.3-201ENST00000541888 LY6KQ17RY6 165 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms