RNA–Protein interactions for RNA: ENST00000540434.1

TMEM258-205, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-205ENST00000540434 KPNA6O60684 536 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 CSPG5O95196 566 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 MMP1P03956 469 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 GTF2F1P35269 517 aaKnown RBP eCLIP12.94□□□□□ -0.34
TMEM258-205ENST00000540434 ZXDAP98168 799 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 RBL2Q08999 1139 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 MFSD10Q14728 455 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 PTGISQ16647 500 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 KIAA0753Q2KHM9 967 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 PRR16Q569H4 304 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.94□□□□□ -0.34
TMEM258-205ENST00000540434 PIK3AP1Q6ZUJ8 805 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 CAGE1Q8TC20 777 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 BICD2Q8TD16 824 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 ZBTB10Q96DT7 871 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 MBOAT7Q96N66 472 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 EHMT1Q9H9B1 1298 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 SH2B1Q9NRF2 756 aaPredicted RBP12.94□□□□□ -0.34
TMEM258-205ENST00000540434 VPS13AQ96RL7 3174 aa12.94□□□□□ -0.34
TMEM258-205ENST00000540434 CYP3A7-CYP3A51PA0A087WV96 503 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 MAFGO15525 162 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 SLC37A4O43826 429 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 PDGFBP01127 241 aaPredicted RBP12.93□□□□□ -0.34
TMEM258-205ENST00000540434 SELPP16109 830 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 CYP3A7P24462 503 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 AVPR2P30518 371 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 TCF7P36402 384 aaPredicted RBP12.93□□□□□ -0.34
TMEM258-205ENST00000540434 USP11P51784 963 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
TMEM258-205ENST00000540434 GPM6BQ13491 265 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 EPC2Q52LR7 807 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 GALNT17Q6IS24 598 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 TRAF7Q6Q0C0 670 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 LRRC8DQ7L1W4 858 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 NIPA1Q7RTP0 329 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 SESTD1Q86VW0 696 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 LLPHQ9BRT6 129 aaKnown RBP12.93□□□□□ -0.34
TMEM258-205ENST00000540434 RALGAPA2Q2PPJ7 1873 aa12.93□□□□□ -0.34
TMEM258-205ENST00000540434 NFASCO94856 1347 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 WDR81Q562E7 1941 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 FAM186AA6NE01 2351 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 H3BRB1 525 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 IPO5O00410 1097 aaKnown RBP12.92□□□□□ -0.34
TMEM258-205ENST00000540434 LINC01565O15544 149 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 ATG7O95352 703 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 CKBP12277 381 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 ATP4AP20648 1035 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 ACTR2P61160 394 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 HTRA4P83105 476 aaPredicted RBP12.92□□□□□ -0.34
TMEM258-205ENST00000540434 NONOQ15233 471 aaKnown RBP eCLIP12.92□□□□□ -0.34
TMEM258-205ENST00000540434 PTPROQ16827 1216 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 TIGD5Q53EQ6 642 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 BRDTQ58F21 947 aaPredicted RBP12.92□□□□□ -0.34
TMEM258-205ENST00000540434 DIS3L2Q8IYB7 885 aaKnown RBP12.92□□□□□ -0.34
TMEM258-205ENST00000540434 SP7Q8TDD2 431 aaPredicted RBP12.92□□□□□ -0.34
TMEM258-205ENST00000540434 SEPT1Q8WYJ6 367 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 CDHR1Q96JP9 859 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 OSBPL7Q9BZF2 842 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 NSUN3Q9H649 340 aaKnown RBP12.92□□□□□ -0.34
TMEM258-205ENST00000540434 TUT1Q9H6E5 874 aaKnown RBP12.92□□□□□ -0.34
TMEM258-205ENST00000540434 SLC9A2Q9UBY0 812 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 NOD1Q9Y239 953 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 INSL6Q9Y581 213 aa12.92□□□□□ -0.34
TMEM258-205ENST00000540434 PROB1E7EW31 1015 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 NOP56O00567 594 aaKnown RBP12.91□□□□□ -0.34
TMEM258-205ENST00000540434 LGR5O75473 907 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 PARNO95453 639 aaKnown RBP12.91□□□□□ -0.34
TMEM258-205ENST00000540434 SMIM10L2AP0DMW4 78 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 SMIM10L2BP0DMW5 78 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 MARK3P27448 753 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 HOXC8P31273 242 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 KRT2P35908 639 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 IKBKEQ14164 716 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 MBTPS1Q14703 1052 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 LETM2Q2VYF4 491 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 Q4G0T1 1027 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 MCTP2Q6DN12 878 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 ABHD15Q6UXT9 468 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 KRT25Q7Z3Z0 450 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 FAM177A1Q8N128 213 aaPredicted RBP12.91□□□□□ -0.34
TMEM258-205ENST00000540434 CCDC155Q8N6L0 562 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 FBXO18Q8NFZ0 1043 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 ETNPPLQ8TBG4 499 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 WASF1Q92558 559 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 SLC5A5Q92911 643 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 POP1Q99575 1024 aaKnown RBP12.91□□□□□ -0.34
TMEM258-205ENST00000540434 ZNF577Q9BSK1 485 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 IGFLR1Q9H665 355 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 JPH1Q9HDC5 661 aaPredicted RBP12.91□□□□□ -0.34
TMEM258-205ENST00000540434 SETD4Q9NVD3 440 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 GTF2IRD1Q9UHL9 959 aa12.91□□□□□ -0.34
TMEM258-205ENST00000540434 KMT2BQ9UMN6 2715 aaPredicted RBP12.9□□□□□ -0.34
TMEM258-205ENST00000540434 IGKV6D-21A0A0A0MT36 114 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 CCDC194A0A1B0GVG4 234 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 H3BNC9 293 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 TREHO43280 583 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 EFCAB14O75071 495 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 TBX10O75333 385 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 PSMD10O75832 226 aa12.9□□□□□ -0.34
TMEM258-205ENST00000540434 ADAM17P78536 824 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms