RNA–Protein interactions for RNA: ENST00000538923.1

MRE11-208, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 5

Gene MRE11, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-208ENST00000538923 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.25□□□□□ -0.77
MRE11-208ENST00000538923 IFIT3O14879 490 aaKnown RBP10.25□□□□□ -0.77
MRE11-208ENST00000538923 UPP2O95045 317 aa10.25□□□□□ -0.77
MRE11-208ENST00000538923 IGHDP01880 384 aa10.25□□□□□ -0.77
MRE11-208ENST00000538923 MRPS9P82933 396 aaKnown RBP10.25□□□□□ -0.77
MRE11-208ENST00000538923 GPM6BQ13491 265 aa10.25□□□□□ -0.77
MRE11-208ENST00000538923 SLC35G1Q2M3R5 365 aa10.25□□□□□ -0.77
MRE11-208ENST00000538923 XRRA1Q6P2D8 792 aa10.25□□□□□ -0.77
MRE11-208ENST00000538923 CYFIP1Q7L576 1253 aa10.25□□□□□ -0.77
MRE11-208ENST00000538923 RALYLQ86SE5 291 aaKnown RBP10.25□□□□□ -0.77
MRE11-208ENST00000538923 TMEM192Q8IY95 271 aa10.25□□□□□ -0.77
MRE11-208ENST00000538923 BCAS3Q9H6U6 928 aa10.25□□□□□ -0.77
MRE11-208ENST00000538923 COL4A6Q14031 1691 aa10.25□□□□□ -0.77
MRE11-208ENST00000538923 LAMA4Q16363 1823 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 H3BQ06 376 aaPredicted RBP10.24□□□□□ -0.77
MRE11-208ENST00000538923 NCK2O43639 380 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 CYTH3O43739 400 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 AVPP01185 164 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 IL9P15248 144 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 ADAM17P78536 824 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 ARHGAP4P98171 946 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 TROAPQ12815 778 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 COL19A1Q14993 1142 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 WTAPQ15007 396 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 TCEAL5Q5H9L2 206 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 INTS6LQ5JSJ4 861 aaKnown RBP10.24□□□□□ -0.77
MRE11-208ENST00000538923 FAM26DQ5JW98 314 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 PCNX4Q63HM2 1172 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 CATIPQ7Z7H3 387 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 RPAINQ86UA6 219 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 CCDC116Q8IYX3 515 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 FIBCD1Q8N539 461 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 GIMAP8Q8ND71 665 aaPredicted RBP10.24□□□□□ -0.77
MRE11-208ENST00000538923 CUL5Q93034 780 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 PABPC5Q96DU9 382 aaKnown RBP10.24□□□□□ -0.77
MRE11-208ENST00000538923 IL17RAQ96F46 866 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 SENP7Q9BQF6 1050 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 IL25Q9H293 177 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 NSUN3Q9H649 340 aaKnown RBP10.24□□□□□ -0.77
MRE11-208ENST00000538923 RTEL1Q9NZ71 1219 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 PRKAG3Q9UGI9 489 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 RWDD3Q9Y3V2 267 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 NRCAMQ92823 1304 aa10.24□□□□□ -0.77
MRE11-208ENST00000538923 C5orf67F2Z3F1 127 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 RBAK-RBAKDNI3L0D1 243 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 RB1P06400 928 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 CYP21A2P08686 494 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 CTNNB1P35222 781 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 WDR4P57081 412 aaKnown RBP10.23□□□□□ -0.77
MRE11-208ENST00000538923 SEMA3FQ13275 785 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 UTP14CQ5TAP6 766 aaKnown RBP10.23□□□□□ -0.77
MRE11-208ENST00000538923 TAF2Q6P1X5 1199 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 EP400NLQ6ZTU2 488 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 RSPH3Q86UC2 560 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 NLRX1Q86UT6 975 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 TRIM50Q86XT4 487 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 NCOA7Q8NI08 942 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 SMARCC2Q8TAQ2 1214 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 LMBR1Q8WVP7 490 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 RUFY2Q8WXA3 655 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 RRP36Q96EU6 259 aaKnown RBP10.23□□□□□ -0.77
MRE11-208ENST00000538923 C11orf84Q9BUA3 381 aaPredicted RBP10.23□□□□□ -0.77
MRE11-208ENST00000538923 OSBPL7Q9BZF2 842 aa10.23□□□□□ -0.77
MRE11-208ENST00000538923 PRRC2BQ5JSZ5 2229 aaKnown RBP10.22□□□□□ -0.77
MRE11-208ENST00000538923 E7EWF7 191 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 PIK3CDO00329 1044 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 DCXO43602 365 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 GHRP10912 638 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 KIF5BP33176 963 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 BMPR1AP36894 532 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 SP4Q02446 784 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 CTC1Q2NKJ3 1217 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 ADHFE1Q8IWW8 467 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 CTCFLQ8NI51 663 aaPredicted RBP10.22□□□□□ -0.77
MRE11-208ENST00000538923 PIBF1Q8WXW3 757 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 CDHR1Q96JP9 859 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 UIMC1Q96RL1 719 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 MAP3K14Q99558 947 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 SPZ1Q9BXG8 430 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 LMAN2LQ9H0V9 348 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 SENP2Q9HC62 589 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 CLDND1Q9NY35 253 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 SEC63Q9UGP8 760 aaKnown RBP10.22□□□□□ -0.77
MRE11-208ENST00000538923 PTPRSQ13332 1948 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 ADGRA3Q8IWK6 1321 aa10.22□□□□□ -0.77
MRE11-208ENST00000538923 MEIS2O14770 477 aa10.21□□□□□ -0.77
MRE11-208ENST00000538923 AXIN1O15169 862 aa10.21□□□□□ -0.77
MRE11-208ENST00000538923 CHRNA1P02708 482 aa10.21□□□□□ -0.77
MRE11-208ENST00000538923 RPLP2P05387 115 aaKnown RBP10.21□□□□□ -0.77
MRE11-208ENST00000538923 GSPT1P15170 499 aaKnown RBP10.21□□□□□ -0.77
MRE11-208ENST00000538923 SMARCA1P28370 1054 aa10.21□□□□□ -0.77
MRE11-208ENST00000538923 SOX11P35716 441 aa10.21□□□□□ -0.77
MRE11-208ENST00000538923 TCF7P36402 384 aaPredicted RBP10.21□□□□□ -0.77
MRE11-208ENST00000538923 ZP2Q05996 745 aa10.21□□□□□ -0.77
MRE11-208ENST00000538923 DHX9Q08211 1270 aaKnown RBP10.21□□□□□ -0.77
MRE11-208ENST00000538923 PPFIA1Q13136 1202 aa10.21□□□□□ -0.77
MRE11-208ENST00000538923 USP17L6PQ6QN14 398 aa10.21□□□□□ -0.77
MRE11-208ENST00000538923 RUFY4Q6ZNE9 571 aa10.21□□□□□ -0.77
MRE11-208ENST00000538923 SEPT1Q8WYJ6 367 aa10.21□□□□□ -0.77
MRE11-208ENST00000538923 CLP1Q92989 425 aaKnown RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms