RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 NLRX1Q86UT6 975 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 SLC9A9Q8IVB4 645 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 CTAGE4Q8IX94 777 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 CDHR1Q96JP9 859 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 TRERF1Q96PN7 1200 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMG6-203ENST00000536871 DDX41Q9UJV9 622 aaKnown RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 PCDHA13Q9Y5I0 950 aa14.91□□□□□ -0.02
SMG6-203ENST00000536871 V9GYY5 206 aaPredicted RBP14.91□□□□□ -0.02
SMG6-203ENST00000536871 ASTN1O14525 1302 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 PRLRP16471 622 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 PTPRAP18433 802 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 EIF4A3P38919 411 aaKnown RBP14.9□□□□□ -0.02
SMG6-203ENST00000536871 RPS6P62753 249 aaKnown RBP14.9□□□□□ -0.02
SMG6-203ENST00000536871 UBXN2AP68543 259 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 AMPD2Q01433 879 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 SLC20A2Q08357 652 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 PGM5Q15124 567 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 EXOC3L4Q17RC7 722 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 NBPF12Q5TAG4 269 aaPredicted RBP14.9□□□□□ -0.02
SMG6-203ENST00000536871 GBP6Q6ZN66 633 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 C4orf19Q8IY42 314 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 CCDC155Q8N6L0 562 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 RBM46Q8TBY0 533 aaKnown RBP14.9□□□□□ -0.02
SMG6-203ENST00000536871 IPO4Q8TEX9 1081 aaKnown RBP14.9□□□□□ -0.02
SMG6-203ENST00000536871 GPRASP2Q96D09 838 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 GBP3Q9H0R5 595 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 PRDM10Q9NQV6 1147 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 TSKSQ9UJT2 592 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 ADAMTS5Q9UNA0 930 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 FRMD4BQ9Y2L6 1034 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 JRKLQ9Y4A0 524 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 SAR1BQ9Y6B6 198 aa14.9□□□□□ -0.02
SMG6-203ENST00000536871 DHX15O43143 795 aaKnown RBP14.89□□□□□ -0.03
SMG6-203ENST00000536871 MCM3P25205 808 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 CCND2P30279 289 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 ABCD1P33897 745 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 HOXD13P35453 343 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 BRD3Q15059 726 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 ODR4Q5SWX8 454 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 ARHGEF16Q5VV41 709 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 TRAPPC11Q7Z392 1133 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 GPC2Q8N158 579 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 SMCR8Q8TEV9 937 aaPredicted RBP14.89□□□□□ -0.03
SMG6-203ENST00000536871 VTI1AQ96AJ9 217 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 DRC1Q96MC2 740 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 CCDC43Q96MW1 224 aaKnown RBP14.89□□□□□ -0.03
SMG6-203ENST00000536871 WRNIP1Q96S55 665 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 RMDN3Q96TC7 470 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 SENP7Q9BQF6 1050 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 ST6GALNAC4Q9H4F1 302 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 ANKEF1Q9NU02 776 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 TMOD4Q9NZQ9 345 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 COL20A1Q9P218 1284 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 DOCK1Q14185 1865 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 WDR64B1ANS9 1081 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 RSPH10B2B2RC85 870 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 EPHB6O15197 1021 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 NOL4O94818 638 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 EGFRP00533 1210 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 RSPH10BP0C881 870 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 DSG3P32926 999 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 MAGEA1P43355 309 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 POLR2FP61218 127 aaKnown RBP14.89□□□□□ -0.03
SMG6-203ENST00000536871 PSMC5P62195 406 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 COG2Q14746 738 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 ASTE1Q2TB18 679 aaPredicted RBP14.89□□□□□ -0.03
SMG6-203ENST00000536871 TDRD12Q587J7 1177 aaKnown RBP14.89□□□□□ -0.03
SMG6-203ENST00000536871 TEX35Q5T0J7 233 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 PADI6Q6TGC4 694 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 PDCD2LQ9BRP1 358 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 PXMP2Q9NR77 195 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 HOXC10Q9NYD6 342 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 KCNG1Q9UIX4 513 aa14.89□□□□□ -0.03
SMG6-203ENST00000536871 CCDC151A5D8V7 595 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 TGFB1I1O43294 461 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 ERLIN1O75477 346 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 AKAP3O75969 853 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 GFPT2O94808 682 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 CCDC172P0C7W6 258 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 RFX1P22670 979 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 MRPS9P82933 396 aaKnown RBP14.88□□□□□ -0.03
SMG6-203ENST00000536871 ASIC2Q16515 512 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 ZNF746Q6NUN9 644 aaPredicted RBP14.88□□□□□ -0.03
SMG6-203ENST00000536871 VPS36Q86VN1 386 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 C12orf56Q8IXR9 622 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 FAM186BQ8IYM0 893 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 NSUN6Q8TEA1 469 aaKnown RBP14.88□□□□□ -0.03
SMG6-203ENST00000536871 HVCN1Q96D96 273 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 GANQ9H2C0 597 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 RNF146Q9NTX7 359 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 GPRC5DQ9NZD1 345 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 SAMM50Q9Y512 469 aa14.88□□□□□ -0.03
SMG6-203ENST00000536871 RBBP6Q7Z6E9 1792 aaKnown RBP14.87□□□□□ -0.03
SMG6-203ENST00000536871 NKRFO15226 690 aaKnown RBP eCLIP14.87□□□□□ -0.03
SMG6-203ENST00000536871 MAPK13O15264 365 aa14.87□□□□□ -0.03
SMG6-203ENST00000536871 MUM1L1Q5H9M0 696 aa14.87□□□□□ -0.03
SMG6-203ENST00000536871 ANGEL2Q5VTE6 544 aaKnown RBP14.87□□□□□ -0.03
SMG6-203ENST00000536871 HGSNATQ68CP4 663 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms