RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 CXCR5P32302 372 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 LRRC63Q05C16 580 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 NDUFAF2Q8N183 169 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 DNAAF3Q8N9W5 541 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 POTEB3A0JP26 581 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 SOWAHDA6NJG2 315 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 PP2D1A8MPX8 630 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 POTECB2RU33 542 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 POTEBQ6S5H4 581 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 ZNF34Q8IZ26 560 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 KIAA1586Q9HCI6 787 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 SLC16A4O15374 487 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 DPEP1P16444 411 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 KRT76Q01546 638 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 ZNRF3Q9ULT6 936 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 PYCARDQ9ULZ3 195 aa15.94■□□□□ 0.14
PCDHA9-202ENST00000532602 TRIM49BA6NDI0 452 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 JADE1Q6IE81 842 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 C1orf228Q6PIY5 440 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 THEM5Q8N1Q8 247 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 ACRBPQ8NEB7 543 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 ZNF302Q9NR11 478 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 POLIQ9UNA4 740 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 KRT1P04264 644 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 ARHGEF18Q6ZSZ5 1173 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 SPZ1Q9BXG8 430 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 ATP6V0A4Q9HBG4 840 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 SPTLC3Q9NUV7 552 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 DAGLAQ9Y4D2 1042 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 PHKA2P46019 1235 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 EPHB1P54762 984 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 IQCB1Q15051 598 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 PPP1R18Q6NYC8 613 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 BZW1Q7L1Q6 419 aaKnown RBP15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 CDO1Q16878 200 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 THAP9Q9H5L6 903 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 GABBR1Q9UBS5 961 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 PNPLA6Q8IY17 1366 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 EFCAB8A8MWE9 144 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 ZNF667Q5HYK9 610 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 CYFIP1Q7L576 1253 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 NEK9Q8TD19 979 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 ATP6V1E2Q96A05 226 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 MTA3Q9BTC8 594 aa15.93■□□□□ 0.14
PCDHA9-202ENST00000532602 POTEFA5A3E0 1075 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 CPP00450 1065 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 POTEIP0CG38 1075 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 GUCY1A2P33402 732 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 PPARGP37231 505 aaPredicted RBP15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 RESP18Q5W5W9 173 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 POTEGQ6S5H5 508 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 POTEEQ6S8J3 1075 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 SFR1Q86XK3 245 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 TRIM42Q8IWZ5 723 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 PTPRUQ92729 1446 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 SPATA33Q96N06 139 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 LMTK2Q8IWU2 1503 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 PRR29P0C7W0 189 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 ANGEL2Q5VTE6 544 aaKnown RBP15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 RAPH1Q70E73 1250 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 PPP1R13BQ96KQ4 1090 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 FNDC3AQ9Y2H6 1198 aaKnown RBP15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 KIDINS220Q9ULH0 1771 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 A0A1B0GUA9 196 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 MAPK6Q16659 721 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 SLC35F6Q8N357 371 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 OR6B3Q8NGW1 331 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 GOLPH3LQ9H4A5 285 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 SLITRK6Q9H5Y7 841 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 EFCC1Q9HA90 598 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 FTCDO95954 541 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 FCER1AP12319 257 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 RNF14Q9UBS8 474 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 TDP2O95551 362 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 TTLL4Q14679 1199 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 DBN1Q16643 649 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 PHLDB3Q6NSJ2 640 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 DEFB132Q7Z7B7 95 aa15.92■□□□□ 0.14
PCDHA9-202ENST00000532602 THOC5Q13769 683 aaKnown RBP15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 SGO2Q562F6 1265 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 CALN1Q9BXU9 219 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 PREX1Q8TCU6 1659 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 HVCN1Q96D96 273 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 CRAMP1Q96RY5 1269 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 DAAM1Q9Y4D1 1078 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 FLT1P17948 1338 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 ARHGAP42A6NI28 874 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 SSTR3P32745 418 aaPredicted RBP15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 CDC42EP5Q6NZY7 148 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 PADI6Q6TGC4 694 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 NOP9Q86U38 636 aaKnown RBP15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 MTRQ99707 1265 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 RASSF4Q9H2L5 321 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 UBN1Q9NPG3 1134 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 OAS2P29728 719 aaKnown RBP15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 TDRD7Q8NHU6 1098 aaKnown RBP15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 ENOX1Q8TC92 643 aaKnown RBP15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 LRRC8CQ8TDW0 803 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 PPP1R12CQ9BZL4 782 aa15.91■□□□□ 0.14
PCDHA9-202ENST00000532602 SCINQ9Y6U3 715 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms