RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 PHF20L1A8MW92 1017 aa12.32□□□□□ -0.44
NXF1-211ENST00000531709 CLTAP09496 248 aa12.32□□□□□ -0.44
NXF1-211ENST00000531709 BCRP11274 1271 aa12.32□□□□□ -0.44
NXF1-211ENST00000531709 ITGA4P13612 1032 aa12.32□□□□□ -0.44
NXF1-211ENST00000531709 GALCP54803 685 aa12.32□□□□□ -0.44
NXF1-211ENST00000531709 DRAP1Q14919 205 aaPredicted RBP12.32□□□□□ -0.44
NXF1-211ENST00000531709 LRCH2Q5VUJ6 765 aa12.32□□□□□ -0.44
NXF1-211ENST00000531709 RPS6KA5O75582 802 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 KRT5P13647 590 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 HNRNPH1P31943 449 aaKnown RBP12.31□□□□□ -0.44
NXF1-211ENST00000531709 ORC2Q13416 577 aaPredicted RBP12.31□□□□□ -0.44
NXF1-211ENST00000531709 ZC2HC1CQ53FD0 456 aaPredicted RBP12.31□□□□□ -0.44
NXF1-211ENST00000531709 C10orf76Q5T2E6 689 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 PPP4R3CPQ6ZMV5 832 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 PHLDB2Q86SQ0 1253 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 CATSPER3Q86XQ3 398 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 UBE2TQ9NPD8 197 aaPredicted RBP12.31□□□□□ -0.44
NXF1-211ENST00000531709 COL1A1P02452 1464 aaPredicted RBP12.31□□□□□ -0.44
NXF1-211ENST00000531709 CCDC169A6NNP5 214 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 LMNB1P20700 586 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 MEI1Q5TIA1 1274 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 OTUD6AQ7L8S5 288 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 MDM1Q8TC05 714 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 SH2D3AQ9BRG2 576 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 RIOX1Q9H6W3 641 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 FAM114A2Q9NRY5 505 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 MYH10P35580 1976 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 SNX1Q13596 522 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 SEPT7Q16181 437 aaKnown RBP12.31□□□□□ -0.44
NXF1-211ENST00000531709 TRIM59Q8IWR1 403 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 TCP11Q8WWU5 503 aa12.31□□□□□ -0.44
NXF1-211ENST00000531709 INTS9Q9NV88 658 aaKnown RBP12.31□□□□□ -0.44
NXF1-211ENST00000531709 ESYT2A0FGR8 921 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 CCDC188H7C350 402 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 K7ENM7 598 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 TLR2O60603 784 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 PPP2R2AP63151 447 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 SLC20A2Q08357 652 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 PTGISQ16647 500 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 RBM26Q5T8P6 1007 aaKnown RBP12.3□□□□□ -0.44
NXF1-211ENST00000531709 CPXCR1Q8N123 301 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 NSRP1Q9H0G5 558 aaKnown RBP12.3□□□□□ -0.44
NXF1-211ENST00000531709 OSGEPQ9NPF4 335 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 A0A1W2PRG0 241 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 EVI5O60447 810 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 USP11P51784 963 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 CASP5P51878 434 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 ERVK-9P63128 1117 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 MYL7Q01449 175 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 PPP4R3AQ6IN85 833 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 ZNF662Q6ZS27 426 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 GLG1Q92896 1179 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 CAVIN3Q969G5 261 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 BICD1Q96G01 975 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 PLCD4Q9BRC7 762 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 VEZTQ9HBM0 779 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 MLXIPLQ9NP71 852 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 HOMER2Q9NSB8 354 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 HNRNPH3P31942 346 aaKnown RBP12.3□□□□□ -0.44
NXF1-211ENST00000531709 NT5C2P49902 561 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 FAM133BQ5BKY9 247 aaKnown RBP12.3□□□□□ -0.44
NXF1-211ENST00000531709 GSTA5Q7RTV2 222 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 SLC35G2Q8TBE7 412 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 PARVGQ9HBI0 331 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 FRMD3A2A2Y4 597 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 BBOX1O75936 387 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 AKAP3O75969 853 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 RPSAP08865 295 aaKnown RBP12.3□□□□□ -0.44
NXF1-211ENST00000531709 PON1P27169 355 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 ABCB5Q2M3G0 1257 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 CCDC38Q502W7 563 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 TBC1D16Q8TBP0 767 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 HAS1Q92839 578 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 PURBQ96QR8 312 aaKnown RBP12.3□□□□□ -0.44
NXF1-211ENST00000531709 ISCUQ9H1K1 167 aa12.3□□□□□ -0.44
NXF1-211ENST00000531709 TYW1Q9NV66 732 aaKnown RBP12.3□□□□□ -0.44
NXF1-211ENST00000531709 MYO5AQ9Y4I1 1855 aaKnown RBP12.3□□□□□ -0.44
NXF1-211ENST00000531709 MYH15Q9Y2K3 1946 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 M0R2N6 131 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 PJA2O43164 708 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 KCNA1Q09470 495 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 TRIP13Q15645 432 aaPredicted RBP12.29□□□□□ -0.44
NXF1-211ENST00000531709 HGSNATQ68CP4 663 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 HIBCHQ6NVY1 386 aaPredicted RBP12.29□□□□□ -0.44
NXF1-211ENST00000531709 DNAJC19Q96DA6 116 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 PLVAPQ9BX97 442 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 EHMT1Q9H9B1 1298 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 GGT7Q9UJ14 662 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 SIPA1L3O60292 1781 aaPredicted RBP12.29□□□□□ -0.44
NXF1-211ENST00000531709 AKAP11Q9UKA4 1901 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 ITIH3Q06033 890 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 PRR5LQ6MZQ0 368 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 NSMFQ6X4W1 530 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 FRMD5Q7Z6J6 570 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 NEK9Q8TD19 979 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 RUBCNQ92622 972 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 PSMD1Q99460 953 aa12.29□□□□□ -0.44
NXF1-211ENST00000531709 ELAC2Q9BQ52 826 aaKnown RBP12.29□□□□□ -0.44
NXF1-211ENST00000531709 STK38LQ9Y2H1 464 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms