RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 HOMER2Q9NSB8 354 aa6.02□□□□□ -1.45
USP47-211ENST00000531513 G3BP2Q9UN86 482 aaKnown RBP6.02□□□□□ -1.45
USP47-211ENST00000531513 A0A087X0B3 334 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 TRAV20A0A0B4J274 112 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 ACOT7O00154 380 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 KCNQ2O43526 872 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 POU3F3P20264 500 aaPredicted RBP6.01□□□□□ -1.45
USP47-211ENST00000531513 EPHA5P54756 1037 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 RAC3P60763 192 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 PABPC4Q13310 644 aaKnown RBP eCLIP6.01□□□□□ -1.45
USP47-211ENST00000531513 USP39Q53GS9 565 aaKnown RBP6.01□□□□□ -1.45
USP47-211ENST00000531513 AGBL4Q5VU57 503 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 FOXB2Q5VYV0 432 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 THNSL2Q86YJ6 484 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 EDAQ92838 391 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 CARD11Q9BXL7 1154 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 CD244Q9BZW8 370 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 CAAP1Q9H8G2 361 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 SLC39A2Q9NP94 309 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 ATP8A1Q9Y2Q0 1164 aa6.01□□□□□ -1.45
USP47-211ENST00000531513 ARID4BQ4LE39 1312 aaPredicted RBP6□□□□□ -1.45
USP47-211ENST00000531513 PLD2O14939 933 aa6□□□□□ -1.45
USP47-211ENST00000531513 RAD17O75943 681 aa6□□□□□ -1.45
USP47-211ENST00000531513 ZNF202O95125 648 aa6□□□□□ -1.45
USP47-211ENST00000531513 SOD2P04179 222 aa6□□□□□ -1.45
USP47-211ENST00000531513 POLD1P28340 1107 aa6□□□□□ -1.45
USP47-211ENST00000531513 STAT3P40763 770 aa6□□□□□ -1.45
USP47-211ENST00000531513 GPR85P60893 370 aa6□□□□□ -1.45
USP47-211ENST00000531513 ABHD18Q0P651 414 aa6□□□□□ -1.45
USP47-211ENST00000531513 RNF151Q2KHN1 245 aa6□□□□□ -1.45
USP47-211ENST00000531513 FNDC3BQ53EP0 1204 aaKnown RBP6□□□□□ -1.45
USP47-211ENST00000531513 HSP90AB2PQ58FF8 381 aa6□□□□□ -1.45
USP47-211ENST00000531513 CEP89Q96ST8 783 aa6□□□□□ -1.45
USP47-211ENST00000531513 DHRS4Q9BTZ2 278 aa6□□□□□ -1.45
USP47-211ENST00000531513 OAZ3Q9UMX2 235 aa6□□□□□ -1.45
USP47-211ENST00000531513 BLACEA4D250 179 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 SOX5P35711 763 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 CDKN1CP49918 316 aaPredicted RBP5.99□□□□□ -1.45
USP47-211ENST00000531513 RRADP55042 308 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 EVA1CP58658 441 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 TGFB2P61812 414 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 TOP3AQ13472 1001 aaPredicted RBP5.99□□□□□ -1.45
USP47-211ENST00000531513 FAM209AQ5JX71 171 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 Q6ZSN1 163 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.99□□□□□ -1.45
USP47-211ENST00000531513 EXTL1Q92935 676 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 EXOC2Q96KP1 924 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 IPO9Q96P70 1041 aaKnown RBP5.99□□□□□ -1.45
USP47-211ENST00000531513 CDC6Q99741 560 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 DPYSL5Q9BPU6 564 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 CSRNP2Q9H175 543 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 IPPKQ9H8X2 491 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 NCOA5Q9HCD5 579 aaKnown RBP5.99□□□□□ -1.45
USP47-211ENST00000531513 ASXL2Q76L83 1435 aa5.99□□□□□ -1.45
USP47-211ENST00000531513 CUTAO60888 179 aa5.98□□□□□ -1.45
USP47-211ENST00000531513 RAPGEF3O95398 923 aa5.98□□□□□ -1.45
USP47-211ENST00000531513 ACO1P21399 889 aaKnown RBP5.98□□□□□ -1.45
USP47-211ENST00000531513 DGCR2P98153 550 aa5.98□□□□□ -1.45
USP47-211ENST00000531513 PTH1RQ03431 593 aa5.98□□□□□ -1.45
USP47-211ENST00000531513 DBPQ10586 325 aaPredicted RBP5.98□□□□□ -1.45
USP47-211ENST00000531513 ODR4Q5SWX8 454 aa5.98□□□□□ -1.45
USP47-211ENST00000531513 DDX42Q86XP3 938 aaKnown RBP eCLIP5.98□□□□□ -1.45
USP47-211ENST00000531513 SCUBE1Q8IWY4 988 aa5.98□□□□□ -1.45
USP47-211ENST00000531513 IFNL3Q8IZI9 196 aa5.98□□□□□ -1.45
USP47-211ENST00000531513 SH3RF2Q8TEC5 729 aa5.98□□□□□ -1.45
USP47-211ENST00000531513 JDP2Q8WYK2 163 aa5.98□□□□□ -1.45
USP47-211ENST00000531513 FAM126AQ9BYI3 521 aaPredicted RBP5.98□□□□□ -1.45
USP47-211ENST00000531513 MAPRE3Q9UPY8 281 aa5.98□□□□□ -1.45
USP47-211ENST00000531513 MRPS23Q9Y3D9 190 aaKnown RBP5.98□□□□□ -1.45
USP47-211ENST00000531513 SLC30A1Q9Y6M5 507 aa5.98□□□□□ -1.45
USP47-211ENST00000531513 TRBV23-1A0A0A0MS06 115 aa5.97□□□□□ -1.45
USP47-211ENST00000531513 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.97□□□□□ -1.45
USP47-211ENST00000531513 FAM47E-STBD1D6RA91 191 aa5.97□□□□□ -1.45
USP47-211ENST00000531513 NARSO43776 548 aaKnown RBP5.97□□□□□ -1.45
USP47-211ENST00000531513 PDE8AO60658 829 aa5.97□□□□□ -1.45
USP47-211ENST00000531513 CR2P20023 1033 aa5.97□□□□□ -1.45
USP47-211ENST00000531513 EXOSC10Q01780 885 aaKnown RBP5.97□□□□□ -1.45
USP47-211ENST00000531513 DUSP8Q13202 625 aa5.97□□□□□ -1.45
USP47-211ENST00000531513 NOLC1Q14978 699 aaKnown RBP eCLIP5.97□□□□□ -1.45
USP47-211ENST00000531513 BRDTQ58F21 947 aaPredicted RBP5.97□□□□□ -1.45
USP47-211ENST00000531513 CT47A1Q5JQC4 288 aaPredicted RBP5.97□□□□□ -1.45
USP47-211ENST00000531513 POLNQ7Z5Q5 900 aa5.97□□□□□ -1.45
USP47-211ENST00000531513 CLUHP3Q96NS8 147 aa5.97□□□□□ -1.45
USP47-211ENST00000531513 OR14A2Q96R54 314 aa5.97□□□□□ -1.45
USP47-211ENST00000531513 MRPL4Q9BYD3 311 aaKnown RBP5.97□□□□□ -1.45
USP47-211ENST00000531513 SLC52A1Q9NWF4 448 aa5.97□□□□□ -1.45
USP47-211ENST00000531513 TCRBV5S4A2TA0A5A2 114 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 GSG1L2A8MUP6 293 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 ALG1L2C9J202 215 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 MATN2O00339 956 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 PLSCR1O15162 318 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 CDC14BO60729 498 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 ETV4P43268 484 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 LSM12Q3MHD2 195 aaKnown RBP5.96□□□□□ -1.46
USP47-211ENST00000531513 ZMAT1Q5H9K5 638 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 RNF180Q86T96 592 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 FMNL3Q8IVF7 1028 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 UBR7Q8N806 425 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 CHFRQ96EP1 664 aa5.96□□□□□ -1.46
USP47-211ENST00000531513 PLA2G12BQ9BX93 195 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms