RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 KLRC4O43908 158 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 ATP2C1P98194 919 aaPredicted RBP15.31■□□□□ 0.04
PCF11-204ENST00000530660 DENND2CQ68D51 928 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 ANKS1AQ92625 1134 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 TMCO1Q9UM00 188 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 NPHP3-ACAD11A0A0J9YXS1 232 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 CCDC169A6NNP5 214 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 PENKP01210 267 aaPredicted RBP15.31■□□□□ 0.04
PCF11-204ENST00000530660 KRT2P35908 639 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 P3H1Q32P28 736 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 MFSD4BQ5TF39 518 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 ENDOVQ8N8Q3 282 aaKnown RBP15.31■□□□□ 0.04
PCF11-204ENST00000530660 ANKRD42Q8N9B4 389 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 TXLNGYQ9BZA5 131 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 VCX3BQ9H321 246 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 PRDM16Q9HAZ2 1276 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 VCX3AQ9NNX9 186 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 CTTNBP2NLQ9P2B4 639 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 CHMP2BQ9UQN3 213 aa15.31■□□□□ 0.04
PCF11-204ENST00000530660 NBPF26B4DH59 902 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 COPB2P35606 906 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 LIFRP42702 1097 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 PMS2P54278 862 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 KCNMA1Q12791 1236 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 NBPF15Q8N660 670 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 METTL13Q8N6R0 699 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 GIMAP8Q8ND71 665 aaPredicted RBP15.3■□□□□ 0.04
PCF11-204ENST00000530660 ATP8B4Q8TF62 1192 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 NRG4Q8WWG1 115 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 SCG3Q8WXD2 468 aaKnown RBP15.3■□□□□ 0.04
PCF11-204ENST00000530660 P2RX5Q93086 422 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 TIPINQ9BVW5 301 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.3■□□□□ 0.043e-11■□□□□ 10.1
PCF11-204ENST00000530660 CCDC87Q9NVE4 849 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 UTP11Q9Y3A2 253 aaKnown RBP15.3■□□□□ 0.04
PCF11-204ENST00000530660 NR2E1Q9Y466 385 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 PGRMC1O00264 195 aaKnown RBP15.3■□□□□ 0.04
PCF11-204ENST00000530660 TPD52L2O43399 206 aaKnown RBP15.3■□□□□ 0.04
PCF11-204ENST00000530660 CERKLQ49MI3 558 aaPredicted RBP15.3■□□□□ 0.04
PCF11-204ENST00000530660 NAALADL2Q58DX5 795 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 NEK9Q8TD19 979 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 TBC1D10AQ9BXI6 508 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 MYLK2Q9H1R3 596 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 PABPC3Q9H361 631 aaKnown RBP15.3■□□□□ 0.04
PCF11-204ENST00000530660 PIH1D3Q9NQM4 214 aaKnown RBP15.3■□□□□ 0.04
PCF11-204ENST00000530660 PRKAG3Q9UGI9 489 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 ZNF532Q9HCE3 1301 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 A0A087X0T9 212 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 PALM3A6NDB9 673 aaPredicted RBP15.3■□□□□ 0.04
PCF11-204ENST00000530660 TLR2O60603 784 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 GH1P01241 217 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 FAM228BP0C875 321 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 PLTPP55058 493 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 STK4Q13043 487 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 ESCO1Q5FWF5 840 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 SNX30Q5VWJ9 437 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 CGB2Q6NT52 195 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 ZNF449Q6P9G9 518 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 ADAT2Q7Z6V5 191 aaKnown RBP15.3■□□□□ 0.04
PCF11-204ENST00000530660 VSIG1Q86XK7 387 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 LRRC8CQ8TDW0 803 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 SPATA16Q9BXB7 569 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 SEMA4AQ9H3S1 761 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 ADAMTS1Q9UHI8 967 aa15.3■□□□□ 0.04
PCF11-204ENST00000530660 FCER1AP12319 257 aa15.29■□□□□ 0.04
PCF11-204ENST00000530660 CCDC6Q16204 474 aa15.29■□□□□ 0.04
PCF11-204ENST00000530660 KHDC1Q4VXA5 237 aaKnown RBP15.29■□□□□ 0.04
PCF11-204ENST00000530660 PDXDC1Q6P996 788 aa15.29■□□□□ 0.04
PCF11-204ENST00000530660 FAM114A1Q8IWE2 563 aa15.29■□□□□ 0.04
PCF11-204ENST00000530660 KLHL14Q9P2G3 628 aa15.29■□□□□ 0.04
PCF11-204ENST00000530660 O00370 1275 aa15.29■□□□□ 0.04
PCF11-204ENST00000530660 VWA3BQ502W6 1294 aa15.29■□□□□ 0.04
PCF11-204ENST00000530660 DAAM2Q86T65 1068 aa15.29■□□□□ 0.04
PCF11-204ENST00000530660 GATA6Q92908 595 aa15.29■□□□□ 0.04
PCF11-204ENST00000530660 ERP27Q96DN0 273 aa15.29■□□□□ 0.04
PCF11-204ENST00000530660 CRAMP1Q96RY5 1269 aa15.29■□□□□ 0.04
PCF11-204ENST00000530660 NUDT17P0C025 328 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 PHKG2P15735 406 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 CCNE1P24864 410 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 DDB1Q16531 1140 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 PARP6Q2NL67 630 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 SFMBT2Q5VUG0 894 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 TCERG1LQ5VWI1 586 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 HIC2Q96JB3 615 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.28■□□□□ 0.043e-13■□□□□ 8.5
PCF11-204ENST00000530660 IQCGQ9H095 443 aaKnown RBP15.28■□□□□ 0.04
PCF11-204ENST00000530660 KIAA1683Q9H0B3 1180 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 LRMDAQ9H2I8 198 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 GFPT2O94808 682 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 AGTP01019 485 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 SKIP12755 728 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 RPL13P26373 211 aaKnown RBP15.28■□□□□ 0.04
PCF11-204ENST00000530660 ZNF365Q70YC5 407 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 EXOC3L1Q86VI1 746 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 SESTD1Q86VW0 696 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 FANCBQ8NB91 859 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 ACTRT1Q8TDG2 376 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 TMEM94Q12767 1356 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 BCL9O00512 1426 aa15.28■□□□□ 0.04
PCF11-204ENST00000530660 TMEM120BA0PK00 339 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms