RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 NFX1Q12986 1120 aaKnown RBP10.24□□□□□ -0.77
CMTM1-210ENST00000528441 PAK2Q13177 524 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 ME3Q16798 604 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 ZNF484Q5JVG2 852 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.24□□□□□ -0.77
CMTM1-210ENST00000528441 DAGLBQ8NCG7 672 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 GJA10Q969M2 543 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 PCYT2Q99447 389 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 NRBP2Q9NSY0 501 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 LRFN2Q9ULH4 789 aa10.24□□□□□ -0.77
CMTM1-210ENST00000528441 MICAL3Q7RTP6 2002 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 ST18O60284 1047 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 JAK2O60674 1132 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 CSPG5O95196 566 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 CIITAP33076 1130 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 GUCY1B3Q02153 619 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 PRKCEQ02156 737 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 MBTPS1Q14703 1052 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 MTERF2Q49AM1 385 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 PLEKHG4Q58EX7 1191 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 ODR4Q5SWX8 454 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 NCAPH2Q6IBW4 605 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 MTHFD1LQ6UB35 978 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 ABHD15Q6UXT9 468 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.23□□□□□ -0.77
CMTM1-210ENST00000528441 FAM177A1Q8N128 213 aaPredicted RBP10.23□□□□□ -0.77
CMTM1-210ENST00000528441 BBXQ8WY36 941 aaPredicted RBP10.23□□□□□ -0.77
CMTM1-210ENST00000528441 C8orf76Q96K31 380 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 RAD9AQ99638 391 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 PHF20Q9BVI0 1012 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 UNC45AQ9H3U1 944 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 SUGCTQ9HAC7 445 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 GJB4Q9NTQ9 266 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 LIMCH1Q9UPQ0 1083 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 PCDHA2Q9Y5H9 948 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 COL1A2P08123 1366 aa10.23□□□□□ -0.77
CMTM1-210ENST00000528441 SMIM35A0A1B0GVV1 85 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 DENND3A2RUS2 1198 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 RFXAPO00287 272 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 DKC1O60832 514 aaKnown RBP eCLIP10.22□□□□□ -0.77
CMTM1-210ENST00000528441 GJB5O95377 273 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 CHRNA1P02708 482 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 OATP04181 439 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 GCFC2P16383 781 aaKnown RBP10.22□□□□□ -0.77
CMTM1-210ENST00000528441 HOXC8P31273 242 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 CD52P31358 61 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 TBC1D8BQ0IIM8 1120 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 Q4G0T1 1027 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 SPOUT1Q5T280 376 aaKnown RBP10.22□□□□□ -0.77
CMTM1-210ENST00000528441 TSHZ1Q6ZSZ6 1077 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 GDPD5Q8WTR4 605 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 ZSCAN31Q96LW9 406 aaPredicted RBP10.22□□□□□ -0.77
CMTM1-210ENST00000528441 RIT2Q99578 217 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 INSL6Q9Y581 213 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 LAMA3Q16787 3333 aa10.22□□□□□ -0.77
CMTM1-210ENST00000528441 SZT2Q5T011 3432 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 EVPLQ92817 2033 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 LCHNA4D1U4 455 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 MBLAC1A4D2B0 266 aaPredicted RBP10.21□□□□□ -0.77
CMTM1-210ENST00000528441 DDX11L8A8MPP1 907 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 RBAK-RBAKDNI3L0D1 243 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 MAGEB2O15479 319 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 RPS6KA5O75582 802 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 ATG7O95352 703 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 VTNP04004 478 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 CLCN3P51790 818 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 NR5A1Q13285 461 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 LPIN1Q14693 890 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 GPNMBQ14956 572 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 TMEM266Q2M3C6 531 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 TCTN1Q2MV58 587 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 FBXO47Q5MNV8 452 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 EFCAB12Q6NXP0 572 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 TRAF7Q6Q0C0 670 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 EP400NLQ6ZTU2 488 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 DIS3L2Q8IYB7 885 aaKnown RBP10.21□□□□□ -0.77
CMTM1-210ENST00000528441 NME8Q8N427 588 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 LRRC71Q8N4P6 559 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 BANK1Q8NDB2 785 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 NSUN7Q8NE18 718 aaKnown RBP10.21□□□□□ -0.77
CMTM1-210ENST00000528441 FBXO22Q8NEZ5 403 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 OXER1Q8TDS5 423 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 NLRP7Q8WX94 980 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 SLC5A5Q92911 643 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 ZNF668Q96K58 619 aaPredicted RBP10.21□□□□□ -0.77
CMTM1-210ENST00000528441 TGS1Q96RS0 853 aaKnown RBP10.21□□□□□ -0.77
CMTM1-210ENST00000528441 OSMRQ99650 979 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 FTHL17Q9BXU8 183 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 CELF4Q9BZC1 486 aaKnown RBP10.21□□□□□ -0.77
CMTM1-210ENST00000528441 KIF3AQ9Y496 699 aa10.21□□□□□ -0.77
CMTM1-210ENST00000528441 DHX15O43143 795 aaKnown RBP10.2□□□□□ -0.78
CMTM1-210ENST00000528441 SLC37A4O43826 429 aa10.2□□□□□ -0.78
CMTM1-210ENST00000528441 CTDNEP1O95476 244 aa10.2□□□□□ -0.78
CMTM1-210ENST00000528441 STAG3L1P0CL83 205 aa10.2□□□□□ -0.78
CMTM1-210ENST00000528441 CTNNB1P35222 781 aa10.2□□□□□ -0.78
CMTM1-210ENST00000528441 DNM2P50570 870 aa10.2□□□□□ -0.78
CMTM1-210ENST00000528441 ADAM17P78536 824 aa10.2□□□□□ -0.78
CMTM1-210ENST00000528441 HMGN5P82970 282 aaKnown RBP10.2□□□□□ -0.78
CMTM1-210ENST00000528441 TAP1Q03518 808 aa10.2□□□□□ -0.78
CMTM1-210ENST00000528441 MGAT3Q09327 533 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms