RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 LRMPQ12912 555 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 KMT5BQ4FZB7 885 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 LENG1Q96BZ8 264 aaPredicted RBP20.86■□□□□ 0.93
SMPD1-203ENST00000527275 C7orf25Q9BPX7 421 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 SAMSN1Q9NSI8 373 aaKnown RBP20.86■□□□□ 0.93
SMPD1-203ENST00000527275 PYCARDQ9ULZ3 195 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 GNEQ9Y223 722 aaKnown RBP20.86■□□□□ 0.93
SMPD1-203ENST00000527275 TRIM17Q9Y577 477 aa20.86■□□□□ 0.93
SMPD1-203ENST00000527275 SYNRGQ9UMZ2 1314 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 ZNF862O60290 1169 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 CYBAP13498 195 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 TMC6Q7Z403 805 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 LRRC8AQ8IWT6 810 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 C4orf19Q8IY42 314 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 KCTD17Q8N5Z5 321 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 KIAA1524Q8TCG1 905 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 AFG1LQ8WV93 481 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 ATP6V0A1Q93050 837 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 EMID1Q96A84 441 aaPredicted RBP20.85■□□□□ 0.93
SMPD1-203ENST00000527275 NAP1L5Q96NT1 182 aaPredicted RBP20.85■□□□□ 0.93
SMPD1-203ENST00000527275 MYH9P35579 1960 aaKnown RBP20.85■□□□□ 0.93
SMPD1-203ENST00000527275 NKRFO15226 690 aaKnown RBP eCLIP20.85■□□□□ 0.93
SMPD1-203ENST00000527275 CACNB2Q08289 660 aaPredicted RBP20.85■□□□□ 0.93
SMPD1-203ENST00000527275 PCYT2Q99447 389 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 TRIM9Q9C026 710 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 ZNF302Q9NR11 478 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 FAM184BQ9ULE4 1060 aa20.85■□□□□ 0.93
SMPD1-203ENST00000527275 MAFBQ9Y5Q3 323 aaPredicted RBP20.85■□□□□ 0.93
SMPD1-203ENST00000527275 LYPLA2O95372 231 aa20.84■□□□□ 0.93
SMPD1-203ENST00000527275 EYA4O95677 639 aa20.84■□□□□ 0.93
SMPD1-203ENST00000527275 YWHABP31946 246 aaKnown RBP20.84■□□□□ 0.93
SMPD1-203ENST00000527275 SLC12A3P55017 1021 aa20.84■□□□□ 0.93
SMPD1-203ENST00000527275 PPTC7Q8NI37 304 aa20.84■□□□□ 0.93
SMPD1-203ENST00000527275 CTNND2Q9UQB3 1225 aa20.84■□□□□ 0.93
SMPD1-203ENST00000527275 GDAQ9Y2T3 454 aa20.84■□□□□ 0.93
SMPD1-203ENST00000527275 TMEM150BA6NC51 233 aa20.83■□□□□ 0.93
SMPD1-203ENST00000527275 MYMKA6NI61 221 aa20.83■□□□□ 0.93
SMPD1-203ENST00000527275 DYNC1LI2O43237 492 aaPredicted RBP20.83■□□□□ 0.93
SMPD1-203ENST00000527275 RHOBTB3O94955 611 aa20.83■□□□□ 0.93
SMPD1-203ENST00000527275 PRKAR2AP13861 404 aaKnown RBP20.83■□□□□ 0.93
SMPD1-203ENST00000527275 GSDMDP57764 484 aa20.83■□□□□ 0.93
SMPD1-203ENST00000527275 ARID5BQ14865 1188 aa20.83■□□□□ 0.93
SMPD1-203ENST00000527275 NOLC1Q14978 699 aaKnown RBP eCLIP20.83■□□□□ 0.93
SMPD1-203ENST00000527275 UTP14CQ5TAP6 766 aaKnown RBP20.83■□□□□ 0.93
SMPD1-203ENST00000527275 TRIM50Q86XT4 487 aa20.83■□□□□ 0.93
SMPD1-203ENST00000527275 SYT2Q8N9I0 419 aaPredicted RBP20.83■□□□□ 0.93
SMPD1-203ENST00000527275 OR6J1Q8NGC5 347 aa20.83■□□□□ 0.93
SMPD1-203ENST00000527275 PXYLP1Q8TE99 480 aa20.83■□□□□ 0.93
SMPD1-203ENST00000527275 RWDD2AQ9UIY3 292 aa20.83■□□□□ 0.93
SMPD1-203ENST00000527275 IGSF9BQ9UPX0 1349 aa20.83■□□□□ 0.93
SMPD1-203ENST00000527275 AKR1A1P14550 325 aa20.83■□□□□ 0.92
SMPD1-203ENST00000527275 PRCPP42785 496 aa20.83■□□□□ 0.92
SMPD1-203ENST00000527275 STAT5BP51692 787 aa20.83■□□□□ 0.92
SMPD1-203ENST00000527275 CCDC47Q96A33 483 aaKnown RBP20.83■□□□□ 0.92
SMPD1-203ENST00000527275 SH2D3AQ9BRG2 576 aa20.83■□□□□ 0.92
SMPD1-203ENST00000527275 HMGCRP04035 888 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 ATP4AP20648 1035 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 CNGA1P29973 690 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 PAK1Q13153 545 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 ANO5Q75V66 913 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 TLK2Q86UE8 772 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 C17orf53Q8N3J3 647 aaPredicted RBP20.82■□□□□ 0.92
SMPD1-203ENST00000527275 GLG1Q92896 1179 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 AZI2Q9H6S1 392 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 PRMT2P55345 433 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 ASIC1P78348 528 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 PRKCEQ02156 737 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 TPD52L1Q16890 204 aaPredicted RBP20.82■□□□□ 0.92
SMPD1-203ENST00000527275 DYMQ7RTS9 669 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 AFAP1L1Q8TED9 768 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 NELFBQ8WX92 580 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 MAPK8IP1Q9UQF2 711 aa20.82■□□□□ 0.92
SMPD1-203ENST00000527275 DKC1O60832 514 aaKnown RBP eCLIP20.81■□□□□ 0.92
SMPD1-203ENST00000527275 STBD1O95210 358 aa20.81■□□□□ 0.92
SMPD1-203ENST00000527275 CYP11B2P19099 503 aa20.81■□□□□ 0.92
SMPD1-203ENST00000527275 IRX5P78411 483 aaPredicted RBP20.81■□□□□ 0.92
SMPD1-203ENST00000527275 ARSHQ5FYA8 562 aa20.81■□□□□ 0.92
SMPD1-203ENST00000527275 GPBP1Q86WP2 473 aa20.81■□□□□ 0.92
SMPD1-203ENST00000527275 ADSSL1Q8N142 457 aa20.81■□□□□ 0.92
SMPD1-203ENST00000527275 DDX12PQ92771 950 aa20.81■□□□□ 0.92
SMPD1-203ENST00000527275 PTCH2Q9Y6C5 1203 aa20.81■□□□□ 0.92
SMPD1-203ENST00000527275 PPFIA4O75335 1185 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 LGR5O75473 907 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 OFD1O75665 1012 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 CCND3P30281 292 aaPredicted RBP20.8■□□□□ 0.92
SMPD1-203ENST00000527275 RARRES1P49788 294 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 RAD51AP2Q09MP3 1159 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 CDKAL1Q5VV42 579 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 FAM160B1Q5W0V3 765 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 PLA2G4FQ68DD2 849 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 VSTM4Q8IW00 320 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 SEPT4O43236 478 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 MMP3P08254 477 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 NPEPPSP55786 919 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 MAP3K21Q5TCX8 1036 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 RUSC1Q9BVN2 902 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 EXOC1Q9NV70 894 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 INTS13Q9NVM9 706 aa20.8■□□□□ 0.92
SMPD1-203ENST00000527275 DBR1Q9UK59 544 aaKnown RBP20.8■□□□□ 0.92
SMPD1-203ENST00000527275 EMSYQ7Z589 1322 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms