RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 SEPHS1P49903 392 aa8.78□□□□□ -1
SPIDR-215ENST00000521798 DNM2P50570 870 aa8.78□□□□□ -1
SPIDR-215ENST00000521798 USP11P51784 963 aa8.78□□□□□ -1
SPIDR-215ENST00000521798 KRT76Q01546 638 aa8.78□□□□□ -1
SPIDR-215ENST00000521798 TXNRD1Q16881 649 aa8.78□□□□□ -1
SPIDR-215ENST00000521798 MTHFSDQ2M296 383 aaKnown RBP8.78□□□□□ -1
SPIDR-215ENST00000521798 RCSD1Q6JBY9 416 aa8.78□□□□□ -1
SPIDR-215ENST00000521798 OTOP1Q7RTM1 612 aa8.78□□□□□ -1
SPIDR-215ENST00000521798 KSR1Q8IVT5 923 aa8.78□□□□□ -1
SPIDR-215ENST00000521798 AGGF1Q8N302 714 aaeCLIP8.78□□□□□ -1
SPIDR-215ENST00000521798 PNISRQ8TF01 805 aaKnown RBP8.78□□□□□ -1
SPIDR-215ENST00000521798 TTC17Q96AE7 1141 aa8.78□□□□□ -1
SPIDR-215ENST00000521798 HDAC8Q9BY41 377 aa8.78□□□□□ -1
SPIDR-215ENST00000521798 MKS1Q9NXB0 559 aa8.78□□□□□ -1
SPIDR-215ENST00000521798 CLEC1BQ9P126 229 aa8.78□□□□□ -1
SPIDR-215ENST00000521798 NUDCQ9Y266 331 aa8.78□□□□□ -1
SPIDR-215ENST00000521798 KDM6AO15550 1401 aaPredicted RBP8.78□□□□□ -1
SPIDR-215ENST00000521798 F8W735 103 aaPredicted RBP8.77□□□□□ -1.01
SPIDR-215ENST00000521798 TGM5O43548 720 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 HSP90AB1P08238 724 aaKnown RBP8.77□□□□□ -1.01
SPIDR-215ENST00000521798 LRRC32Q14392 662 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 SAFBQ15424 915 aaKnown RBP eCLIP8.77□□□□□ -1.01
SPIDR-215ENST00000521798 ARHGAP29Q52LW3 1261 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 BROXQ5VW32 411 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 CDPF1Q6NVV7 123 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 C16orf59Q7L2K0 433 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 TICAM2Q86XR7 235 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 TMEM130Q8N3G9 435 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 CISD2Q8N5K1 135 aaKnown RBP8.77□□□□□ -1.01
SPIDR-215ENST00000521798 TOP6BLQ8N6T0 577 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 C2orf69Q8N8R5 385 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 RCBTB1Q8NDN9 531 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 ENOX1Q8TC92 643 aaKnown RBP8.77□□□□□ -1.01
SPIDR-215ENST00000521798 PIGBQ92521 554 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 EZH1Q92800 747 aaPredicted RBP8.77□□□□□ -1.01
SPIDR-215ENST00000521798 RUNDC1Q96C34 613 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 DCAF5Q96JK2 942 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 STRBPQ96SI9 672 aaKnown RBP8.77□□□□□ -1.01
SPIDR-215ENST00000521798 YIPF2Q9BWQ6 316 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 MAF1Q9H063 256 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 IPPKQ9H8X2 491 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 GPATCH2Q9NW75 528 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 CNTNAP4Q9C0A0 1308 aa8.77□□□□□ -1.01
SPIDR-215ENST00000521798 SHISA3A0PJX4 238 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 GAS2O43903 313 aaKnown RBP8.76□□□□□ -1.01
SPIDR-215ENST00000521798 PCDHGA12O60330 932 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 IL33O95760 270 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 NFICP08651 508 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 PRKAR2BP31323 418 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 BMP8BP34820 402 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 KIR3DL1P43629 444 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 ST5P78524 1137 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 GALEQ14376 348 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 GRAMD1BQ3KR37 738 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 COBLL1Q53SF7 1204 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 C1orf141Q5JVX7 400 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 GPR158Q5T848 1215 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 EEF1DP3Q658K8 133 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 PODNQ7Z5L7 613 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 PHACTR3Q96KR7 559 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 LRGUKQ96M69 825 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 SLC12A9Q9BXP2 914 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 LGR6Q9HBX8 967 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 GNL3LQ9NVN8 582 aaKnown RBP8.76□□□□□ -1.01
SPIDR-215ENST00000521798 DDX20Q9UHI6 824 aaKnown RBP8.76□□□□□ -1.01
SPIDR-215ENST00000521798 ZNF652Q9Y2D9 606 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 PCDHGA9Q9Y5G4 932 aaKnown RBP8.76□□□□□ -1.01
SPIDR-215ENST00000521798 PCDHGA8Q9Y5G5 932 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 PCDHGA7Q9Y5G6 932 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 PCDHGA6Q9Y5G7 932 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 PCDHGA3Q9Y5H0 932 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 PCDHGA2Q9Y5H1 932 aa8.76□□□□□ -1.01
SPIDR-215ENST00000521798 FRMPD2Q68DX3 1309 aaPredicted RBP8.76□□□□□ -1.01
SPIDR-215ENST00000521798 ITGB4P16144 1822 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 HMGB1P1B2RPK0 211 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-215ENST00000521798 ERVV-2B6SEH9 535 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 FAM47E-STBD1D6RA91 191 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 RBAK-RBAKDNI3L0D1 243 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 APAF1O14727 1248 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 DYNC1LI2O43237 492 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-215ENST00000521798 GRK2P25098 689 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 GRK3P35626 688 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 PHC1P78364 1004 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 R3HDM1Q15032 1099 aaKnown RBP8.75□□□□□ -1.01
SPIDR-215ENST00000521798 TERF2Q15554 542 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 SEZ6L2Q6UXD5 910 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 ZNF655Q8N720 491 aaPredicted RBP8.75□□□□□ -1.01
SPIDR-215ENST00000521798 DAGLBQ8NCG7 672 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 TRIM11Q96F44 468 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 MMP19Q99542 508 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 NMRK2Q9NPI5 230 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 DDX21Q9NR30 783 aaKnown RBP eCLIP8.75□□□□□ -1.01
SPIDR-215ENST00000521798 MAN1C1Q9NR34 630 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 TMOD3Q9NYL9 352 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 PAPPAQ13219 1627 aa8.75□□□□□ -1.01
SPIDR-215ENST00000521798 PALLDQ8WX93 1383 aa8.74□□□□□ -1.01
SPIDR-215ENST00000521798 RNMTO43148 476 aaKnown RBP8.74□□□□□ -1.01
SPIDR-215ENST00000521798 SART1O43290 800 aaKnown RBP8.74□□□□□ -1.01
SPIDR-215ENST00000521798 XPOTO43592 962 aaKnown RBP8.74□□□□□ -1.01
SPIDR-215ENST00000521798 SLURP2P0DP57 97 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms