RNA–Protein interactions for RNA: ENST00000516414.1

RNU6-1049P-201, Transcript of RNA, U6 small nuclear 1049, pseudogene, humanhuman

BASIC

Gene RNU6-1049P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1049P-201ENST00000516414 BMS1Q14692 1282 aaKnown RBP0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ODF1Q14990 250 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TCEAL1Q15170 157 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DDR2Q16832 855 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 LSM12Q3MHD2 195 aaKnown RBP0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TMEM119Q4V9L6 283 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FLYWCH1Q4VC44 716 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MFSD14BQ5SR56 506 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GJC2Q5T442 439 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TMCO4Q5TGY1 634 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KANK2Q63ZY3 851 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CNNM4Q6P4Q7 775 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PKN3Q6P5Z2 889 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 LMBR1LQ6UX01 489 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ETV3LQ6ZN32 361 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZNF662Q6ZS27 426 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 Q6ZUG5 572 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 Q6ZVL8 140 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KRTAP5-2Q701N4 177 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MRGPREQ86SM8 312 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RTN4RL1Q86UN2 441 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SGMS1Q86VZ5 419 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 NOSTRINQ8IVI9 506 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FAM126BQ8IXS8 530 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RAVER1Q8IY67 606 aaKnown RBP0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZGPATQ8N5A5 531 aaKnown RBP0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ANKRD53Q8N9V6 530 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GIMAP8Q8ND71 665 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MDM1Q8TC05 714 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RASGRP4Q8TDF6 673 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 COG1Q8WTW3 980 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CHTF18Q8WVB6 975 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ASB10Q8WXI3 467 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 KISS1RQ969F8 398 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 RCC1LQ96I51 464 aaKnown RBP0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TEPSINQ96N21 525 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GPR101Q96P66 508 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 GBP4Q96PP9 640 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 CRBNQ96SW2 442 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MMS19Q96T76 1030 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MMP19Q99542 508 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ELF4Q99607 663 aaPredicted RBP0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TM9SF2Q99805 663 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ADAM2Q99965 735 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MACROD1Q9BQ69 325 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 MYL10Q9BUA6 226 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SPATA9Q9BWV2 254 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 WDR11Q9BZH6 1224 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TMEM168Q9H0V1 697 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 L2HGDHQ9H9P8 463 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 TRIM39Q9HCM9 518 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 SLTMQ9NWH9 1034 aaKnown RBP eCLIP0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 PLA2G3Q9NZ20 509 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ACTR10Q9NZ32 417 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DTLQ9NZJ0 730 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DKK3Q9UBP4 350 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DSEQ9UL01 958 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 ZBTB21Q9ULJ3 1066 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 USP18Q9UMW8 372 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 DMRT1Q9Y5R6 373 aa0.59□□□□□ -2.31
RNU6-1049P-201ENST00000516414 FER1L4A9Z1Z3 1794 aa0.59□□□□□ -2.32
RNU6-1049P-201ENST00000516414 XDHP47989 1333 aa0.59□□□□□ -2.32
RNU6-1049P-201ENST00000516414 KAT6AQ92794 2004 aa0.59□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ROBO2Q9HCK4 1378 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 KLRG2A4D1S0 409 aaPredicted RBP0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PRAMEF25A6NGN4 478 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PRSS29PA6NIE9 313 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 CGB1A6NKQ9 187 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 KRTAP29-1A8MX34 341 aaPredicted RBP0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 B4E1Z4 1266 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GOLGA6L22H0YM25 854 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SCAMP3O14828 347 aaKnown RBP0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 U2SURPO15042 1029 aaKnown RBP0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SMARCA5O60264 1052 aaPredicted RBP0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 KPNA6O60684 536 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 NDUFA10O95299 355 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 VNN1O95497 513 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SCG5P05408 212 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SSBP05455 408 aaKnown RBP eCLIP0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ITGB1P05556 798 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GNAT1P11488 350 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 PFKLP17858 780 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 POU3F3P20264 500 aaPredicted RBP0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GATA3P23771 443 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GRK2P25098 689 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 HOXC12P31275 282 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GRK3P35626 688 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 LTBRP36941 435 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ARL4AP40617 200 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 NOP2P46087 812 aaKnown RBP0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 MECP2P51608 486 aaKnown RBP0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ADCY7P51828 1080 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 RABGGTBP53611 331 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 GJA9P57773 515 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 CHMP4BP1P59074 171 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 RNASE9P60153 205 aaKnown RBP0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 NKX3-2P78367 333 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 ST5P78524 1137 aa0.58□□□□□ -2.32
RNU6-1049P-201ENST00000516414 SLC6A3Q01959 620 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms