RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 STK38Q15208 465 aa18.43■□□□□ 0.54
HMGCL-209ENST00000513148 SH3RF1Q7Z6J0 888 aa18.43■□□□□ 0.54
HMGCL-209ENST00000513148 IGSF22Q8N9C0 903 aa18.43■□□□□ 0.54
HMGCL-209ENST00000513148 TOX2Q96NM4 488 aa18.43■□□□□ 0.54
HMGCL-209ENST00000513148 SH2D3AQ9BRG2 576 aa18.43■□□□□ 0.54
HMGCL-209ENST00000513148 PDLIM7Q9NR12 457 aa18.43■□□□□ 0.54
HMGCL-209ENST00000513148 NRCAMQ92823 1304 aa18.42■□□□□ 0.54
HMGCL-209ENST00000513148 TREHO43280 583 aa18.42■□□□□ 0.54
HMGCL-209ENST00000513148 SLITRK3O94933 977 aa18.42■□□□□ 0.54
HMGCL-209ENST00000513148 CD4P01730 458 aa18.42■□□□□ 0.54
HMGCL-209ENST00000513148 ERMNQ8TAM6 284 aa18.42■□□□□ 0.54
HMGCL-209ENST00000513148 BBXQ8WY36 941 aaPredicted RBP18.42■□□□□ 0.54
HMGCL-209ENST00000513148 TMEM39AQ9NV64 488 aa18.42■□□□□ 0.54
HMGCL-209ENST00000513148 ZMYND8Q9ULU4 1186 aaPredicted RBP18.42■□□□□ 0.54
HMGCL-209ENST00000513148 HBP1O60381 514 aa18.42■□□□□ 0.54
HMGCL-209ENST00000513148 MED24O75448 989 aa18.42■□□□□ 0.54
HMGCL-209ENST00000513148 SNX29Q8TEQ0 813 aa18.42■□□□□ 0.54
HMGCL-209ENST00000513148 FAM167AQ96KS9 214 aa18.42■□□□□ 0.54
HMGCL-209ENST00000513148 CTAGE1Q96RT6 745 aa18.42■□□□□ 0.54
HMGCL-209ENST00000513148 HSD17B14Q9BPX1 270 aa18.42■□□□□ 0.54
HMGCL-209ENST00000513148 A0A087WWV3 80 aa18.41■□□□□ 0.54
HMGCL-209ENST00000513148 GNAT1P11488 350 aa18.41■□□□□ 0.54
HMGCL-209ENST00000513148 CCT6AP40227 531 aaKnown RBP18.41■□□□□ 0.54
HMGCL-209ENST00000513148 PDIA5Q14554 519 aa18.41■□□□□ 0.54
HMGCL-209ENST00000513148 SLC39A14Q15043 492 aa18.41■□□□□ 0.54
HMGCL-209ENST00000513148 ZRSR1Q15695 479 aaKnown RBP18.41■□□□□ 0.54
HMGCL-209ENST00000513148 HAUS3Q68CZ6 603 aa18.41■□□□□ 0.54
HMGCL-209ENST00000513148 PLA2G4FQ68DD2 849 aa18.41■□□□□ 0.54
HMGCL-209ENST00000513148 CATSPER3Q86XQ3 398 aa18.41■□□□□ 0.54
HMGCL-209ENST00000513148 LINC00301Q8NCQ3 95 aa18.41■□□□□ 0.54
HMGCL-209ENST00000513148 ZSWIM4Q9H7M6 989 aa18.41■□□□□ 0.54
HMGCL-209ENST00000513148 PRKAG2Q9UGJ0 569 aa18.41■□□□□ 0.54
HMGCL-209ENST00000513148 TUBE1Q9UJT0 475 aa18.41■□□□□ 0.54
HMGCL-209ENST00000513148 ZBTB39O15060 712 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 HOXC8P31273 242 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 MTERF2Q49AM1 385 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 XKR3Q5GH77 459 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 POTEGQ6S5H5 508 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 NEK9Q8TD19 979 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 PPP1R12CQ9BZL4 782 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 NRBP2Q9NSY0 501 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 SPTLC3Q9NUV7 552 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 FBXO2Q9UK22 296 aaPredicted RBP18.4■□□□□ 0.54
HMGCL-209ENST00000513148 ATP6V1DQ9Y5K8 247 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 TCHHQ07283 1943 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 TRIM43BA6NCK2 446 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 ZBTB42B2RXF5 422 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 DKC1O60832 514 aaKnown RBP eCLIP18.4■□□□□ 0.54
HMGCL-209ENST00000513148 SPATA31C1P0DKV0 1188 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 SPECC1Q5M775 1068 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 MARCH8Q5T0T0 291 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 KRT79Q5XKE5 535 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 ANO5Q75V66 913 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 ZNF710Q8N1W2 664 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 GPT2Q8TD30 523 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 TRIM43Q96BQ3 446 aaPredicted RBP18.4■□□□□ 0.54
HMGCL-209ENST00000513148 CLIC6Q96NY7 704 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 CFAP45Q9UL16 551 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 ARID2Q68CP9 1835 aa18.4■□□□□ 0.54
HMGCL-209ENST00000513148 SPTLC2O15270 562 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 STBD1O95210 358 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 YWHABP31946 246 aaKnown RBP18.39■□□□□ 0.53
HMGCL-209ENST00000513148 C4orf19Q8IY42 314 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 PIGOQ8TEQ8 1089 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 WNT8BQ93098 351 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 CSRNP2Q9H175 543 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 HIPK3Q9H422 1215 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 TUFT1Q9NNX1 390 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 TBX21Q9UL17 535 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 NR2E3Q9Y5X4 410 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 RRN3P2A6NIE6 340 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 YEATS4O95619 227 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 RPA1P27694 616 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 NPEPPSP55786 919 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 KRT85P78386 507 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 ADAM17P78536 824 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 ECM1Q16610 540 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 ZNF484Q5JVG2 852 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 RUFY4Q6ZNE9 571 aa18.39■□□□□ 0.53
HMGCL-209ENST00000513148 DHX38Q92620 1227 aaKnown RBP18.39■□□□□ 0.53
HMGCL-209ENST00000513148 SYAP1Q96A49 352 aaPredicted RBP18.39■□□□□ 0.53
HMGCL-209ENST00000513148 POLR3CQ9BUI4 534 aaPredicted RBP18.39■□□□□ 0.53
HMGCL-209ENST00000513148 SRPRBQ9Y5M8 271 aaKnown RBP18.39■□□□□ 0.53
HMGCL-209ENST00000513148 UMODL1Q5DID0 1318 aa18.38■□□□□ 0.53
HMGCL-209ENST00000513148 COL1A2P08123 1366 aa18.38■□□□□ 0.53
HMGCL-209ENST00000513148 KLRC1P26715 233 aa18.38■□□□□ 0.53
HMGCL-209ENST00000513148 ATL3Q6DD88 541 aa18.38■□□□□ 0.53
HMGCL-209ENST00000513148 MTHFD1LQ6UB35 978 aa18.38■□□□□ 0.53
HMGCL-209ENST00000513148 SERINC5Q86VE9 423 aa18.38■□□□□ 0.53
HMGCL-209ENST00000513148 KRI1Q8N9T8 703 aaKnown RBP18.38■□□□□ 0.53
HMGCL-209ENST00000513148 CEP170P1Q96L14 293 aa18.38■□□□□ 0.53
HMGCL-209ENST00000513148 PLIN2Q99541 437 aa18.38■□□□□ 0.53
HMGCL-209ENST00000513148 MMTAG2Q9BU76 263 aaKnown RBP18.38■□□□□ 0.53
HMGCL-209ENST00000513148 BMP2KQ9NSY1 1161 aaPredicted RBP18.38■□□□□ 0.53
HMGCL-209ENST00000513148 RAG1P15918 1043 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 ITGB8P26012 769 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 LONP1P36776 959 aaKnown RBP18.37■□□□□ 0.53
HMGCL-209ENST00000513148 PTK7Q13308 1070 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 ZNF579Q8NAF0 562 aaKnown RBP18.37■□□□□ 0.53
HMGCL-209ENST00000513148 CCDC43Q96MW1 224 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms