RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 IPPKQ9H8X2 491 aa6.28□□□□□ -1.4
USO1-202ENST00000508454 MCM8Q9UJA3 840 aa6.28□□□□□ -1.4
USO1-202ENST00000508454 ZNF839A8K0R7 811 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 EYA4O95677 639 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 SOD2P04179 222 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 EPHB1P54762 984 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 PFKPQ01813 784 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 CT47A1Q5JQC4 288 aaPredicted RBP6.27□□□□□ -1.41
USO1-202ENST00000508454 FAM209AQ5JX71 171 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 ZNF585AQ6P3V2 769 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 NSMFQ6X4W1 530 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 LHFPL2Q6ZUX7 228 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.27□□□□□ -1.41
USO1-202ENST00000508454 LRRC47Q8N1G4 583 aaKnown RBP6.27□□□□□ -1.41
USO1-202ENST00000508454 EVI5LQ96CN4 794 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 RPS6KC1Q96S38 1066 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 CD244Q9BZW8 370 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 KATNBL1Q9H079 304 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 BARX1Q9HBU1 254 aaPredicted RBP6.27□□□□□ -1.41
USO1-202ENST00000508454 PTPN22Q9Y2R2 807 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 ZDHHC9Q9Y397 364 aa6.27□□□□□ -1.41
USO1-202ENST00000508454 PLD2O14939 933 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 CHGBP05060 677 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 GNAT1P11488 350 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 C6P13671 934 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 GLRBP48167 497 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 UBE4AQ14139 1066 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 PPP2R5AQ15172 486 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 CCSAPQ6IQ19 270 aaPredicted RBP6.26□□□□□ -1.41
USO1-202ENST00000508454 KCTD1Q719H9 257 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 GPR155Q7Z3F1 870 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 Q8TCH9 128 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 CCDC136Q96JN2 1154 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 DSEQ9UL01 958 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 MAPRE3Q9UPY8 281 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 MRPS23Q9Y3D9 190 aaKnown RBP6.26□□□□□ -1.41
USO1-202ENST00000508454 TRAF6Q9Y4K3 522 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 SLC4A7Q9Y6M7 1214 aa6.26□□□□□ -1.41
USO1-202ENST00000508454 EIF3JO75822 258 aaKnown RBP6.25□□□□□ -1.41
USO1-202ENST00000508454 FSHBP01225 129 aa6.25□□□□□ -1.41
USO1-202ENST00000508454 TACR2P21452 398 aa6.25□□□□□ -1.41
USO1-202ENST00000508454 GUCY2FP51841 1108 aa6.25□□□□□ -1.41
USO1-202ENST00000508454 FNDC3BQ53EP0 1204 aaKnown RBP6.25□□□□□ -1.41
USO1-202ENST00000508454 ZC3H12BQ5HYM0 836 aaKnown RBP6.25□□□□□ -1.41
USO1-202ENST00000508454 PALM2Q8IXS6 379 aa6.25□□□□□ -1.41
USO1-202ENST00000508454 IFNL3Q8IZI9 196 aa6.25□□□□□ -1.41
USO1-202ENST00000508454 ATL2Q8NHH9 583 aa6.25□□□□□ -1.41
USO1-202ENST00000508454 ZNF747Q9BV97 191 aa6.25□□□□□ -1.41
USO1-202ENST00000508454 CHST12Q9NRB3 414 aa6.25□□□□□ -1.41
USO1-202ENST00000508454 TRAV20A0A0B4J274 112 aa6.24□□□□□ -1.41
USO1-202ENST00000508454 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.24□□□□□ -1.41
USO1-202ENST00000508454 IQCA1LA6NCM1 817 aa6.24□□□□□ -1.41
USO1-202ENST00000508454 FOXS1O43638 330 aa6.24□□□□□ -1.41
USO1-202ENST00000508454 DNAJC8O75937 253 aaPredicted RBP6.24□□□□□ -1.41
USO1-202ENST00000508454 RASGRP1O95267 797 aa6.24□□□□□ -1.41
USO1-202ENST00000508454 SLPIP03973 132 aa6.24□□□□□ -1.41
USO1-202ENST00000508454 C6orf222P0C671 652 aaPredicted RBP6.24□□□□□ -1.41
USO1-202ENST00000508454 ZNF888P0CJ79 500 aaPredicted RBP6.24□□□□□ -1.41
USO1-202ENST00000508454 ACVRL1P37023 503 aa6.24□□□□□ -1.41
USO1-202ENST00000508454 SELENOPP49908 381 aa6.24□□□□□ -1.41
USO1-202ENST00000508454 SPIRE1Q08AE8 756 aa6.24□□□□□ -1.41
USO1-202ENST00000508454 CNNM4Q6P4Q7 775 aa6.24□□□□□ -1.41
USO1-202ENST00000508454 RALYLQ86SE5 291 aaKnown RBP6.24□□□□□ -1.41
USO1-202ENST00000508454 LRRTM3Q86VH5 581 aa6.24□□□□□ -1.41
USO1-202ENST00000508454 GNRHR2Q96P88 292 aa6.24□□□□□ -1.41
USO1-202ENST00000508454 DHRS4Q9BTZ2 278 aa6.24□□□□□ -1.41
USO1-202ENST00000508454 ARHGAP20Q9P2F6 1191 aa6.24□□□□□ -1.41
USO1-202ENST00000508454 CCDC163A0A0D9SF12 145 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 FAM90A27PA6NNH2 459 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 WNT9AO14904 365 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 KIF3BO15066 747 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 AKAP10O43572 662 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 CREB3O43889 395 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 ZNF623O75123 536 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 AMY2AP04746 511 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 ENO2P09104 434 aaPredicted RBP6.23□□□□□ -1.41
USO1-202ENST00000508454 AMY2BP19961 511 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 RAB27AP51159 221 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 NEK2P51955 445 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 BIRC2Q13490 618 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 MTMR1Q13613 665 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 SPDYAQ5MJ70 313 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 TCTN3Q6NUS6 607 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 C14orf80Q86SX3 495 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 SMAD5Q99717 465 aaKnown RBP6.23□□□□□ -1.41
USO1-202ENST00000508454 TACO1Q9BSH4 297 aaKnown RBP6.23□□□□□ -1.41
USO1-202ENST00000508454 RTFDC1Q9BY42 306 aaPredicted RBP6.23□□□□□ -1.41
USO1-202ENST00000508454 SLC39A2Q9NP94 309 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 JADE2Q9NQC1 790 aa6.23□□□□□ -1.41
USO1-202ENST00000508454 TRBV23-1A0A0A0MS06 115 aa6.22□□□□□ -1.41
USO1-202ENST00000508454 FAM47E-STBD1D6RA91 191 aa6.22□□□□□ -1.41
USO1-202ENST00000508454 DBPQ10586 325 aaPredicted RBP6.22□□□□□ -1.41
USO1-202ENST00000508454 SEPT7Q16181 437 aaKnown RBP6.22□□□□□ -1.41
USO1-202ENST00000508454 KRTAP5-3Q6L8H2 238 aa6.22□□□□□ -1.41
USO1-202ENST00000508454 SORCS2Q96PQ0 1159 aa6.22□□□□□ -1.41
USO1-202ENST00000508454 MRPL4Q9BYD3 311 aaKnown RBP6.22□□□□□ -1.41
USO1-202ENST00000508454 TRIM8Q9BZR9 551 aa6.22□□□□□ -1.41
USO1-202ENST00000508454 CCDC8Q9H0W5 538 aaPredicted RBP6.22□□□□□ -1.41
USO1-202ENST00000508454 SEC61A2Q9H9S3 476 aa6.22□□□□□ -1.41
USO1-202ENST00000508454 TRIM39Q9HCM9 518 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms