RNA–Protein interactions for RNA: ENST00000508454.1

USO1-202, Transcript of USO1 vesicle transport factor, humanhuman

TSL 3

Gene USO1, Length 365 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USO1-202ENST00000508454 AEBP2Q6ZN18 517 aaPredicted RBP28.36■■■□□ 2.13
USO1-202ENST00000508454 CHIC1Q5VXU3 224 aa27.04■■□□□ 1.92
USO1-202ENST00000508454 SENP3Q9H4L4 574 aaPredicted RBP23.97■■□□□ 1.43
USO1-202ENST00000508454 PHF23Q9BUL5 403 aaPredicted RBP23.81■■□□□ 1.4
USO1-202ENST00000508454 FOXD1Q16676 465 aa22.42■■□□□ 1.18
USO1-202ENST00000508454 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
USO1-202ENST00000508454 PPP6R1Q9UPN7 881 aa21.2■□□□□ 0.98
USO1-202ENST00000508454 ADRA2BP18089 450 aa21.08■□□□□ 0.97
USO1-202ENST00000508454 PIAS4Q8N2W9 510 aaPredicted RBP20.92■□□□□ 0.94
USO1-202ENST00000508454 MSH5O43196 834 aa20.77■□□□□ 0.92
USO1-202ENST00000508454 POTEDQ86YR6 584 aa20.02■□□□□ 0.8
USO1-202ENST00000508454 MAPK8IP2Q13387 824 aaPredicted RBP19.32■□□□□ 0.68
USO1-202ENST00000508454 DMRT2Q9Y5R5 561 aa19.11■□□□□ 0.65
USO1-202ENST00000508454 SCAF1Q9H7N4 1312 aaKnown RBP19.09■□□□□ 0.65
USO1-202ENST00000508454 PPP4R3CPQ6ZMV5 832 aa19.02■□□□□ 0.64
USO1-202ENST00000508454 CNKSR2Q8WXI2 1034 aa18.58■□□□□ 0.56
USO1-202ENST00000508454 HOXD11P31277 338 aaPredicted RBP18.5■□□□□ 0.55
USO1-202ENST00000508454 RNF216Q9NWF9 866 aaPredicted RBP18.37■□□□□ 0.53
USO1-202ENST00000508454 NCBP3Q53F19 620 aaKnown RBP18.23■□□□□ 0.51
USO1-202ENST00000508454 DCAF8L1A6NGE4 600 aa18.18■□□□□ 0.5
USO1-202ENST00000508454 NPM3O75607 178 aaKnown RBP18.13■□□□□ 0.49
USO1-202ENST00000508454 KCNA4P22459 653 aa18■□□□□ 0.47
USO1-202ENST00000508454 RNF39Q9H2S5 420 aa17.84■□□□□ 0.45
USO1-202ENST00000508454 DNAJC5BQ9UF47 199 aa17.78■□□□□ 0.44
USO1-202ENST00000508454 CACNB1Q02641 598 aaPredicted RBP17.68■□□□□ 0.42
USO1-202ENST00000508454 C1QBPQ07021 282 aaKnown RBP17.51■□□□□ 0.39
USO1-202ENST00000508454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.51■□□□□ 0.39
USO1-202ENST00000508454 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
USO1-202ENST00000508454 U3KPZ7 1027 aaPredicted RBP17.3■□□□□ 0.36
USO1-202ENST00000508454 SPINK5Q9NQ38 1064 aaPredicted RBP16.99■□□□□ 0.31
USO1-202ENST00000508454 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
USO1-202ENST00000508454 CAPN15O75808 1086 aa16.82■□□□□ 0.28
USO1-202ENST00000508454 DSG3P32926 999 aa16.78■□□□□ 0.28
USO1-202ENST00000508454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.69■□□□□ 0.26
USO1-202ENST00000508454 MYCNP04198 464 aaPredicted RBP16.69■□□□□ 0.26
USO1-202ENST00000508454 HNRNPUL2Q1KMD3 747 aaKnown RBP16.69■□□□□ 0.26
USO1-202ENST00000508454 SAMD1Q6SPF0 538 aaPredicted RBP16.66■□□□□ 0.26
USO1-202ENST00000508454 FOXD4L1Q9NU39 408 aa16.66■□□□□ 0.26
USO1-202ENST00000508454 ZBTB22O15209 634 aa16.65■□□□□ 0.26
USO1-202ENST00000508454 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
USO1-202ENST00000508454 APLP2Q06481 763 aa16.6■□□□□ 0.25
USO1-202ENST00000508454 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
USO1-202ENST00000508454 ABCB7O75027 752 aa16.53■□□□□ 0.24
USO1-202ENST00000508454 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
USO1-202ENST00000508454 POLA2Q14181 598 aa16.26■□□□□ 0.19
USO1-202ENST00000508454 ATXN8OSP0DMR3 200 aa16.1■□□□□ 0.17
USO1-202ENST00000508454 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
USO1-202ENST00000508454 RBM42Q9BTD8 480 aaKnown RBP15.86■□□□□ 0.13
USO1-202ENST00000508454 ZBTB12Q9Y330 459 aaPredicted RBP15.85■□□□□ 0.13
USO1-202ENST00000508454 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
USO1-202ENST00000508454 OSCARQ8IYS5 282 aa15.77■□□□□ 0.12
USO1-202ENST00000508454 MKRN4PQ13434 485 aaPredicted RBP15.69■□□□□ 0.1
USO1-202ENST00000508454 POTEHQ6S545 545 aa15.68■□□□□ 0.1
USO1-202ENST00000508454 AKT1S1Q96B36 256 aa15.61■□□□□ 0.09
USO1-202ENST00000508454 FBLN2P98095 1184 aa15.55■□□□□ 0.08
USO1-202ENST00000508454 CHRDL2Q6WN34 429 aa15.52■□□□□ 0.08
USO1-202ENST00000508454 REM2Q8IYK8 340 aaPredicted RBP15.5■□□□□ 0.07
USO1-202ENST00000508454 SPDYE2BA6NHP3 402 aa15.44■□□□□ 0.06
USO1-202ENST00000508454 SPDYE6P0CI01 402 aa15.44■□□□□ 0.06
USO1-202ENST00000508454 SPDYE2Q495Y8 402 aa15.44■□□□□ 0.06
USO1-202ENST00000508454 PITPNM1O00562 1244 aa15.36■□□□□ 0.05
USO1-202ENST00000508454 SSUH2Q9Y2M2 353 aa15.35■□□□□ 0.05
USO1-202ENST00000508454 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
USO1-202ENST00000508454 PIP4P2Q8N4L2 257 aa15.24■□□□□ 0.03
USO1-202ENST00000508454 FXR2P51116 673 aaKnown RBP eCLIP15.18■□□□□ 0.02
USO1-202ENST00000508454 PABPN1Q86U42 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
USO1-202ENST00000508454 SPDYE1Q8NFV5 336 aaPredicted RBP15.09■□□□□ 0.01
USO1-202ENST00000508454 CLEC11AQ9Y240 323 aa15.05■□□□□ -0
USO1-202ENST00000508454 SPDYE4A6NLX3 237 aa14.92□□□□□ -0.02
USO1-202ENST00000508454 PRKAR2AP13861 404 aaKnown RBP14.91□□□□□ -0.02
USO1-202ENST00000508454 CHADLQ6NUI6 762 aa14.84□□□□□ -0.03
USO1-202ENST00000508454 PRR29P0C7W0 189 aa14.83□□□□□ -0.04
USO1-202ENST00000508454 EVX2Q03828 476 aa14.82□□□□□ -0.04
USO1-202ENST00000508454 SP7Q8TDD2 431 aaPredicted RBP14.8□□□□□ -0.04
USO1-202ENST00000508454 HAX1O00165 279 aa14.79□□□□□ -0.04
USO1-202ENST00000508454 PROM2Q8N271 834 aa14.73□□□□□ -0.05
USO1-202ENST00000508454 C19orf67A6NJJ6 358 aa14.69□□□□□ -0.06
USO1-202ENST00000508454 CREBZFQ9NS37 354 aa14.64□□□□□ -0.07
USO1-202ENST00000508454 STAG3Q9UJ98 1225 aa14.63□□□□□ -0.07
USO1-202ENST00000508454 FARP1Q9Y4F1 1045 aaPredicted RBP14.61□□□□□ -0.07
USO1-202ENST00000508454 MNX1P50219 401 aaPredicted RBP14.47□□□□□ -0.09
USO1-202ENST00000508454 CD44P16070 742 aaKnown RBP14.44□□□□□ -0.1
USO1-202ENST00000508454 FKBP8Q14318 412 aa14.41□□□□□ -0.1
USO1-202ENST00000508454 GABBR2O75899 941 aa14.4□□□□□ -0.1
USO1-202ENST00000508454 ZNF579Q8NAF0 562 aaKnown RBP14.27□□□□□ -0.13
USO1-202ENST00000508454 ZRANB1Q9UGI0 708 aa14.26□□□□□ -0.13
USO1-202ENST00000508454 NPM1P06748 294 aaKnown RBP eCLIP14.21□□□□□ -0.13
USO1-202ENST00000508454 POTEIP0CG38 1075 aa14.19□□□□□ -0.14
USO1-202ENST00000508454 MIER1Q8N108 512 aa14.15□□□□□ -0.14
USO1-202ENST00000508454 PHF12Q96QT6 1004 aa14.15□□□□□ -0.14
USO1-202ENST00000508454 GALR2O43603 387 aaPredicted RBP14.11□□□□□ -0.15
USO1-202ENST00000508454 CLCN6P51797 869 aa14.11□□□□□ -0.15
USO1-202ENST00000508454 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
USO1-202ENST00000508454 RASEFQ8IZ41 740 aa14.05□□□□□ -0.16
USO1-202ENST00000508454 PLCD3Q8N3E9 789 aa14.05□□□□□ -0.16
USO1-202ENST00000508454 TSPYL2Q9H2G4 693 aaPredicted RBP14.04□□□□□ -0.16
USO1-202ENST00000508454 CCDC61Q9Y6R9 512 aa14.04□□□□□ -0.16
USO1-202ENST00000508454 PLEKHG5O94827 1062 aa14□□□□□ -0.17
USO1-202ENST00000508454 NUBP1P53384 320 aa13.99□□□□□ -0.17
USO1-202ENST00000508454 MS4A3Q96HJ5 214 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms