RNA–Protein interactions for RNA: ENST00000507142.5

NEK1-203, Transcript of NIMA related kinase 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NEK1, Length 5,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-203ENST00000507142 TRMT1Q9NXH9 659 aaKnown RBP10.3□□□□□ -0.76
NEK1-203ENST00000507142 KCPQ6ZWJ8 1503 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 GPR25O00155 361 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 GPR182O15218 404 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 DGAT1O75907 488 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 CD58P19256 250 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 EFNA5P52803 228 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 PLA2G4FQ68DD2 849 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 FAM207AQ9NSI2 230 aaPredicted RBP10.3□□□□□ -0.76
NEK1-203ENST00000507142 MSRAQ9UJ68 235 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 SPOPO43791 374 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 OR1G1P47890 313 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 GPC3P51654 580 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 EMC2Q15006 297 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 AXDND1Q5T1B0 1012 aaPredicted RBP10.3□□□□□ -0.76
NEK1-203ENST00000507142 GLYCTKQ8IVS8 523 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 TMEM199Q8N511 208 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 SAMD3Q8N6K7 520 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 KIF12Q96FN5 646 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 KIF9Q9HAQ2 790 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 ALDH7A1P49419 539 aaKnown RBP10.3□□□□□ -0.76
NEK1-203ENST00000507142 SFR1Q86XK3 245 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 ACAP3Q96P50 834 aa10.3□□□□□ -0.76
NEK1-203ENST00000507142 SPDYE16A6NNV3 312 aaPredicted RBP10.29□□□□□ -0.76
NEK1-203ENST00000507142 GADD45BO75293 160 aaPredicted RBP10.29□□□□□ -0.76
NEK1-203ENST00000507142 CABYRO75952 493 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 CASQ1P31415 396 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 MAP2K2P36507 400 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 RFC5P40937 340 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 PTGISQ16647 500 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 SH3TC2Q8TF17 1288 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 FAM213AQ9BRX8 229 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 TUFT1Q9NNX1 390 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 TTLL3Q9Y4R7 772 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 H3BRB1 525 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 FARP2O94887 1054 aaPredicted RBP10.29□□□□□ -0.76
NEK1-203ENST00000507142 MORC3Q14149 939 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 TSGA10IPQ3SY00 556 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 HEXIM2Q96MH2 286 aaKnown RBP10.29□□□□□ -0.76
NEK1-203ENST00000507142 PDCD2LQ9BRP1 358 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 MIS12Q9H081 205 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 TUT1Q9H6E5 874 aaKnown RBP10.29□□□□□ -0.76
NEK1-203ENST00000507142 A1CFQ9NQ94 594 aaKnown RBP10.29□□□□□ -0.76
NEK1-203ENST00000507142 ASAP2O43150 1006 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 COBLO75128 1261 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 PRMT2P55345 433 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 VEPH1Q14D04 833 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 MUM1L1Q5H9M0 696 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 CXCL17Q6UXB2 119 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 GRAMD1CQ8IYS0 662 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 RIT2Q99578 217 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 SETD4Q9NVD3 440 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 MYO1AQ9UBC5 1043 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 HIP1RO75146 1068 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 PDE6CP51160 858 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 MFSD10Q14728 455 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 CTU1Q7Z7A3 348 aaKnown RBP10.29□□□□□ -0.76
NEK1-203ENST00000507142 DDX12PQ92771 950 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 TMEM169Q96HH4 297 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 CRACR2AQ9BSW2 395 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 ENTPD7Q9NQZ7 604 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 HAUS2Q9NVX0 235 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 CNTNAP5Q8WYK1 1306 aa10.29□□□□□ -0.76
NEK1-203ENST00000507142 KLRG2A4D1S0 409 aaPredicted RBP10.28□□□□□ -0.76
NEK1-203ENST00000507142 KRT83P78385 493 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 KIF5AQ12840 1032 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 ZNF667Q5HYK9 610 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.28□□□□□ -0.76
NEK1-203ENST00000507142 SIX6OS1Q8N1H7 587 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 RNF139Q8WU17 664 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 RAD54LQ92698 747 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 CCDC114Q96M63 670 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 CENPHQ9H3R5 247 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 CTTNBP2NLQ9P2B4 639 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.28□□□□□ -0.76
NEK1-203ENST00000507142 GOLGA6L10A0A0M3HER8 536 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 GABPAQ06546 454 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 KLHL30Q0D2K2 578 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 ZNF484Q5JVG2 852 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 C7orf61Q8IZ16 206 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 IGSF22Q8N9C0 903 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 LINC00301Q8NCQ3 95 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.28□□□□□ -0.76
NEK1-203ENST00000507142 NPM3O75607 178 aaKnown RBP10.28□□□□□ -0.76
NEK1-203ENST00000507142 MFAP3P55082 362 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 SLC51AQ86UW1 340 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 EHBP1Q8NDI1 1231 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 AMHP03971 560 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 STAT1P42224 750 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 TAF3Q5VWG9 929 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 METTL7BQ6UX53 244 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 SLC12A6Q9UHW9 1150 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 NHSL1Q5SYE7 1610 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 ANKRD26Q9UPS8 1709 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 THAP12O43422 761 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 EGFRP00533 1210 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 TERF1P54274 439 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 PTK2Q05397 1052 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 TROAPQ12815 778 aa10.28□□□□□ -0.76
NEK1-203ENST00000507142 CCDC144BQ3MJ40 725 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms