RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 BZW1Q7L1Q6 419 aaKnown RBP17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 TXLNGQ9NUQ3 528 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 MYO3BQ8WXR4 1341 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 POTEMA6NI47 508 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 RXRBP28702 533 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 SNAP25P60880 206 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 TRIP13Q15645 432 aaPredicted RBP17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 SLFNL1Q499Z3 407 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 TTLL6Q8N841 843 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 MCUQ8NE86 351 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 EPS15L1Q9UBC2 864 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 CPSF3Q9UKF6 684 aaKnown RBP17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 ANGPTL3Q9Y5C1 460 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 NR3C1P04150 777 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 EEPD1Q7L9B9 569 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 KLHL29Q96CT2 875 aa17.78■□□□□ 0.44
PCDHA1-203ENST00000504120 SRGAP2CP0DJJ0 459 aa17.77■□□□□ 0.44
PCDHA1-203ENST00000504120 COG7P83436 770 aa17.77■□□□□ 0.44
PCDHA1-203ENST00000504120 TOGARAM2Q6ZUX3 1019 aa17.77■□□□□ 0.44
PCDHA1-203ENST00000504120 SFR1Q86XK3 245 aa17.77■□□□□ 0.44
PCDHA1-203ENST00000504120 TBC1D22BQ9NU19 505 aa17.77■□□□□ 0.44
PCDHA1-203ENST00000504120 SFI1A8K8P3 1242 aa17.77■□□□□ 0.44
PCDHA1-203ENST00000504120 MTMR1Q13613 665 aa17.77■□□□□ 0.44
PCDHA1-203ENST00000504120 DALRD3Q5D0E6 543 aaKnown RBP17.77■□□□□ 0.44
PCDHA1-203ENST00000504120 PIGOQ8TEQ8 1089 aa17.77■□□□□ 0.44
PCDHA1-203ENST00000504120 CD209Q9NNX6 404 aa17.77■□□□□ 0.44
PCDHA1-203ENST00000504120 TBK1Q9UHD2 729 aa17.77■□□□□ 0.44
PCDHA1-203ENST00000504120 FEM1BQ9UK73 627 aa17.77■□□□□ 0.44
PCDHA1-203ENST00000504120 SYNGAP1Q96PV0 1343 aa17.77■□□□□ 0.44
PCDHA1-203ENST00000504120 A0A087WUV0 522 aaPredicted RBP17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 TTI1O43156 1089 aa17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 ZBED1O96006 694 aa17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 OSBPL5Q9H0X9 879 aaPredicted RBP17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 ACTR5Q9H9F9 607 aaPredicted RBP17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 ATP6V0A4Q9HBG4 840 aa17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 TJP3O95049 919 aa17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 PRCPP42785 496 aa17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 DMTNQ08495 405 aa17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 BBS9Q3SYG4 887 aa17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 XXYLT1Q8NBI6 393 aa17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 OXER1Q8TDS5 423 aa17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 FAM167AQ96KS9 214 aa17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 TTC1Q99614 292 aa17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 NCAPGQ9BPX3 1015 aa17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 NFU1Q9UMS0 254 aa17.77■□□□□ 0.43
PCDHA1-203ENST00000504120 IQANK1A0A1B0GTG1 560 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 PALMO75781 387 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 MMP10P09238 476 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 RFX1P22670 979 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 RCSD1Q6JBY9 416 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 FBXO38Q6PIJ6 1188 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 PCGF5Q86SE9 256 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 ISCA1Q9BUE6 129 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 PTPRUQ92729 1446 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 SCARA5Q6ZMJ2 495 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 GIMAP8Q8ND71 665 aaPredicted RBP17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 PYROXD1Q8WU10 500 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 COL15A1P39059 1388 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 TRIM49BA6NDI0 452 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 ARID5BQ14865 1188 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 ARL13BQ3SXY8 428 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 ZNF667Q5HYK9 610 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 PODNQ7Z5L7 613 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 LRFN2Q9ULH4 789 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 MROH7-TTC4A0A0A0MT08 1334 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 WDR64B1ANS9 1081 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 AXIN2Q9Y2T1 843 aa17.76■□□□□ 0.43
PCDHA1-203ENST00000504120 TSGA10IPQ3SY00 556 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 SEPT12Q8IYM1 358 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 ATP6V1E2Q96A05 226 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 DDX27Q96GQ7 796 aaKnown RBP17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 RBM41Q96IZ5 413 aaKnown RBP17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 BARHL2Q9NY43 387 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 FBXO40Q9UH90 709 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 CPDO75976 1380 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 XPAP23025 273 aaPredicted RBP17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 PSMA2P25787 234 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 COASYQ13057 564 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 Q3C1V9 767 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 PADI6Q6TGC4 694 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 NLRP4Q96MN2 994 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 LRRC53A6NM62 1247 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 PNMA6AP0CW24 399 aaPredicted RBP17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 CDC27P30260 824 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 ANKRD20A4Q4UJ75 823 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 ANKRD20A8PQ5CZ79 823 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 ANKRD20A2Q5SQ80 823 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 ANKRD20A1Q5TYW2 823 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 SGMS1Q86VZ5 419 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 DCLK2Q8N568 766 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 NUDCD1Q96RS6 583 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 ADAM22Q9P0K1 906 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 KIDINS220Q9ULH0 1771 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 UBN2Q6ZU65 1347 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 KRT76Q01546 638 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 IQCB1Q15051 598 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 FAM83BQ5T0W9 1011 aa17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 PDCD7Q8N8D1 485 aaKnown RBP17.75■□□□□ 0.43
PCDHA1-203ENST00000504120 PPP1R9AQ9ULJ8 1098 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms